rformassspectrometry/MetaboAnnotation rformassspectrometry/MetaboAnnotation

  • Stars
    star
    15
  • Rank 1,371,379 (Top 28 %)
  • Language
    R
  • Created over 3 years ago
  • Updated 6 months ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
rformassspectrometry/MetaboAnnotation
github

rformassspectrometry

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

High level functionality to support and simplify metabolomics data annotation.

More Repositories

1

Spectra

Low level infrastructure to handle MS spectra
R
36
star
2

metaRbolomics-book

The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
TeX
27
star
3

QFeatures

Quantitative features for mass spectrometry data
R
24
star
4

CompoundDb

Creating and using (chemical) compound databases
R
16
star
5

MsCoreUtils

Core Utils for Mass Spectrometry Data
R
16
star
6

RforMassSpectrometry

The R for Mass Spectrometry meta-package
R
14
star
7

RforMassSpectrometry.org

The R for Mass Spectrometry Initiative home page
HTML
10
star
8

SpectriPy

Interfacing R's Spectra package with the Python world.
R
9
star
9

MetaboCoreUtils

Core utilities for metabolomics.
R
8
star
10

book

R for Mass Spectrometry documentation
TeX
7
star
11

SpectraQL

Mass Spec Query Language (MassQL) support for Spectra
R
7
star
12

MsBackendTimsTof

Spectra backend supporting TimsTOF data files using the opentimsr package.
R
7
star
13

unimod

Amino acid modifications for mass spectrometry
R
6
star
14

MsFeatures

Functionality for Mass Spectrometry Features.
R
5
star
15

MsExperiment

Managing and Processing Mass Spectrometry Experiments
R
5
star
16

ProtGenerics

S4 generic functions for Bioconductor mass spectrometry infrastructure
R
5
star
17

Deprecated-MsBackendSql

R
4
star
18

MsBackendMgf

Mass Spectrometry Data Backend for Mascot Generic Format (mgf) Files
R
4
star
19

MsBackendMsp

Mass Spectrometry Data Backend for MSP Files
R
4
star
20

MsQuantitation

Mass Spectrometry Quantitation
R
3
star
21

SpectraVis

Visualising Spectra Data
R
3
star
22

PSMatch

Peptide Spectrum Matching
R
3
star
23

MsBackendSql

MsBackend adding support to store/access mass spectrometry data in large SQL databases through the Spectra R package.
R
3
star
24

MsBackendMassbank

A prototype backend to parse MassBank records into Spectra
R
3
star
25

MsDataHub

Mass Spectrometry Data on ExperimentHub
R
1
star
26

MsBackendWeizMass

Spectra backend for WeizMass (v2) databases
R
1
star
27

universe

The R for Mass Spectrometry R Universe
1
star
28

MsBackendHmdb

Mass spectrometry data backend (MsBackend) for Spectra supporting import and handling of MS/MS spectra from the Human Metabolome Database (HMDB).
R
1
star