reconhub/guides reconhub/guides

  • Stars
    star
    5
  • Rank 2,861,937 (Top 57 %)
  • Language
    HTML
  • License
    MIT License
  • Created about 5 years ago
  • Updated over 4 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
reconhub/guides
github

reconhub

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Recon's guidelines for writing statistical analyses reports

More Repositories

1

covid19hub

Community-driven COVID-19 analytics in R
58
star
2

incidence

☣📈📉☣ Compute and visualise incidence
R
58
star
3

learn

RECON learn: a free, open platform for training material on epidemics analysis
HTML
35
star
4

outbreaker2

Disease outbreak reconstruction from epidemiological and genetic data
R
30
star
5

reconhub.github.io

Official website for RECON - The R Epidemics CONsortium
R
29
star
6

linelist

An R package to import, clean, and store case data
R
25
star
7

epiflows

☣✈️ Risk assessment of travel-related disease spread
R
18
star
8

trendbreaker

Analysing epidemic trends using AutoML approaches.
R
17
star
9

epicontacts

Handling, Visualisation and Analysis of Epidemiological Contacts
R
15
star
10

aweek

Convert dates to arbitrary week definitions 📆
R
15
star
11

projections

Projections of future incidence
R
14
star
12

epitrix

Small Helpers and Tricks for Epidemics Analysis
R
10
star
13

deployer

Self-contained R environment on a thumb drive
R
9
star
14

earlyR

Estimation of infectiousness in the early stage of an outbreak, with short-term predictions.
R
9
star
15

report_factories_templates

Templates of report factories
R
8
star
16

docker

Various docker images for RECON
8
star
17

phylo-practical

Introduction to phylogenetics using R, using influenza virus sequences
TeX
8
star
18

dibbler

Investigation of food-borne disease outbreaks
HTML
7
star
19

matchmaker

Dictionary-based cleaning for categorical variables
R
7
star
20

nomad

📦👉🎒 Pack up R to take away
R
7
star
21

simulacr

Helper functions for outbreak simulation
R
5
star
22

datacomparator

Shiny app for comparing 2 versions of a dataset
R
5
star
23

distcrete

📈👉📊 Discretise distributions
R
4
star
24

occupancy

WIP - Forecast hospital bed occupancy from data on admissions and length of stay
R
4
star
25

rfextras

R
4
star
26

reconhub

All stable packages from RECON
R
3
star
27

recon-helpdesk

Open an issue in this repository if you have general questions about RECON packages
3
star
28

gisfirstaid

A collection of code gists for mapping infectious diseases
HTML
3
star
29

epimaps

R
3
star
30

recon.ui

Template shiny GUI for RECON packages
CSS
2
star
31

vimes

Visualisation and monitoring of epidemics
R
2
star
32

rmd-example

Short Rmarkdown example, using a simple analysis of incubation period in simulated Ebola outbreak
2
star
33

epicookbook

A cookbook of epidemiological models in R
R
2
star
34

talks

Material for RECON talks distributed under CC-BY
TeX
1
star
35

rubus

1
star
36

introduction-to-r-stegen

HTML
1
star
37

tasks

1
star
38

hackfest1

RECON hackfest 1
JavaScript
1
star
39

argus

Helpers for WHO's Argus
R
1
star
40

drat

📦📦📦 drat repository
HTML
1
star
41

msf-sitrep

Sitrep template for MSF
R
1
star
42

EOIM-Copenhagen

EPIET Outbreak Investigation Module: Copenhagen
R
1
star
43

branchr

R Estimation from Cluster Sizes
R
1
star
44

recontools

Tools to develop RECON packages
R
1
star
45

course-malta-2018

website for RECON short course in Malta 2018
HTML
1
star
46

ESCAIDE_2019_workshop

The website of the R workshops for ESCAIDE 2019
CSS
1
star