raacampbell/two-photon-toolbox

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MATLAB
Created over 4 years ago
Updated about 2 years ago

raacampbell/two-photon-toolbox

raacampbell

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Basic toolbox for analysis of in vivo 2-photon data. Originally written at Glenn Turner's lab, CSHL, when I was working with flies.

shadedErrorBar

Produce elegant shaded error bars in MATLAB

notBoxPlot

plots things that are not boxplots

openstage

Arduino-based microscope stage controller

sigstar

add significance stars to MATLAB plots

matlab_elastix

MATLAB Elastix wrapper

measurePSF

Measure PSF FWHM along different axes

HiLo_SIM

Basic implementation of HiLo structured illumination algorithm in MATLAB

volView

Simple image stack visualizer for MATLAB

lensdistort

Correct barrel and pincushion distortion

airdilutionolfactometer

Air dilution olfactometer design

mrubicks

MATLAB Rubik's cube plots

alicat-matlab

Control Alicat flow controllers from MATLAB

linux_cli_intro

Presentation for intro to Linux CLI using the Linux CLI

AllenAtlasTopDown

Top-down view of the Allen Atlas in stereotaxic coords