quinngroup/JupyterDay2018-Cilia-Segmentation

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quinngroup/JupyterDay2018-Cilia-Segmentation

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Presentation materials for my talk on cilia segmentation for Jupyter Day ATL.

deep-representations-clustering

This repository is an attempt to replicate the results for the paper: "Learning Deep Representations for Graph Clustering".

Jupyter Notebook

ornet

Organellar segmentation, tracking, and network modeling.

Generative-Models

Generative Models

OSDSC

Open Source Distributed Spectral Clustering

python-indexedrdd

A Python port of IndexedRDD.

vaccine_misinformation

Repo for J. Waring's CURO 2017 project

Twitter-Embedding-Analysis

Word Embeddings on Twitter Data

Jupyter Notebook

JI-2016-MRS2578

Neutrophil motion tracking using optical flow.

Jupyter Notebook

3Dcell_tracking_DSAA2019

This repository contains the codes for the paper we submitted to IEEE DSAA 2019 : "Lightweight and Scalable Particle Tracking and Motion Clustering of 3D Cell Trajectories"

Neutrophils

Jupyter Notebook

littlejohn

Docker setup and documentation for building the images used on the LittleJohn UGA cluster.

open-science-2018

Materials for Open Science guest lecture with Dr. Nicole Lazar.

cilia-metrics

Scripts for computing metrics from ciliary motion.

Jupyter Notebook

pyflink-r1dl

Rank-1 Dictionary Learning in PyFlink

fergus-ssl

Python implementation of the Rob Fergus semi-supervised learning algorithm.

Jupyter Notebook

dr1dl-pyspark

Dictionary Learning in PySpark

parkinsons_multimodal

dockerfiles

Odd collections of Docker files.