portugueslab/Dragomir-et-al-2019-modelfit

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portugueslab/Dragomir-et-al-2019-modelfit

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Repository for the code accompanying the Dragmorir et al 2019. publication

arrayqueues

Multiprocessing queues for numpy arrays using shared memory

stytra

A modular package to control stimulation and track behaviour

split_dataset

A minimal package for saving and reading large HDF5-based chunked arrays.

VolumeRegistration.jl

Subpixel volumetric registration

Stytra-with-DeepLabCut

Example of stytra usage without zebrafish

napari-hdf5

lightparam

Another attempt at parameters in Python

brunoise

2-photon scanning software in Python

bouter

PaddedBlocks.jl

Utilities for generating blocks for processing data, with optional padding

sashimi

Lightsheet control

Knogler_etal_2019_eLife

MATLAB source code for Purkinje cell spike extraction and summary analyses

fimpy

napari-split-dataset

hdf5/split-dataset file reader for napari