pillowlab/activelearningTCs pillowlab/activelearningTCs

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  • Language
    MATLAB
  • License
    MIT License
  • Created over 6 years ago
  • Updated about 2 years ago
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pillowlab/activelearningTCs
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pillowlab

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More Repositories

1

GLMspiketraintutorial

Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data
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2

neuroGLM

Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).
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3

GLMspiketraintutorial_python

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46
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4

GLMspiketools

Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).
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5

LNPfitting

Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood
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6

PYMentropy

Discrete entropy estimator using the Pitman-Yor mixture (PYM) prior
MATLAB
18
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7

BinaryPursuitSpikeSorting

Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)
MATLAB
13
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8

psytrack_learning

Extension of Psytrack to include learning
Jupyter Notebook
10
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9

fastASD

Fast inference for high-D receptive fields using Automatic Smoothness Determination (ASD)
MATLAB
10
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10

CDMentropy

Centered Dirichlet Mixture entropy estimator for binary data
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9
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11

adaptivePsychophysicsToolbox

For effective analysis and optimal experiment design for psychophysics experiments
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9
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12

StepRampMCMC

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6
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13

gaudy-images

Code for "High-contrast 'gaudy' images improve the training of deep neural network models of visual cortex" by Cowley and Pillow, NeurIPS 2020.
Python
6
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14

PoissonBalancedNets

Implementation of Balanced Spiking Networks with Poisson Neurons, from Rullan & Pillow 2019.
MATLAB
5
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15

iSTAC

information-theoretic Spike-Triggered Average and Covariance (iSTAC) estimator for receptive fields
MATLAB
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16

adaptiveOptimalTraining

adaptive optimal training of animal behavior
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4
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17

mTDRdemo

Self-contained code to demonstrate how to use mTDR.
MATLAB
4
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18

GQM

Fitting routines for moment-based estimation of a Generalized Quadratic Model (GQM)
MATLAB
2
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19

VLR-STRF

variational low rank estimation for spatiotemporal receptive fields
MATLAB
2
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20

multilinearRegression

MATLAB
2
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21

GaussHermiteQuadrature

Gauss-Hermite Quadrature (for approximating integrals w.r.t. a Gaussian density)
MATLAB
2
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22

CBEM

conductance-based encoding model
MATLAB
2
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23

DRD

DRD model described in Wu et.al, 2014
MATLAB
1
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24

invBlockTriDiag

Efficiently compute central and off-diagonal blocks of the inverse of a block-tridiagonal matrix
MATLAB
1
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25

raisedCosineBasis

makes raised cosine basis with log scaling of x axis
MATLAB
1
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26

neu314data

Datasets for "Mathematical Tools for Neuroscience" (NEU 314)
1
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