• This repository has been archived on 28/Oct/2021
  • Stars
    star
    1
  • Language
    Python
  • Created about 5 years ago
  • Updated over 3 years ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

This repo is replaced with https://github.com/pharmbio/robotlab-labrobots and will be archived or deleted.

More Repositories

1

sciluigi

A light-weight wrapper library around Spotify's Luigi workflow library to make writing scientific workflows more fluent, flexible and modular
Python
333
star
2

plaid

PLAID (Plate Layouts using Artificial Intelligence Design) is a flexible constraint-programming model representing the Plate Layout Design problem.
Jupyter Notebook
13
star
3

plot_utils

Repo that groups utility functions for e.g. plotting of Conformal prediction metrics
Jupyter Notebook
13
star
4

phil_LNP_modelling

Python code and jupyter notebooks to accompany the manuscript "Deep learning models for lipid-nanoparticle-based drug delivery"
Jupyter Notebook
11
star
5

robotlab

Cell painting and imaging with robots
Python
10
star
6

cellprofiler-docker

Dockerfile to build a working CellProfiler (http://cellprofiler.org/) image
Dockerfile
10
star
7

CP-Chem-MoA

Jupyter Notebook
8
star
8

imagedb

Image database for pharmbio microscope images
JavaScript
5
star
9

aros

Open Automated Robotic System for Biological Laboratories
5
star
10

LC-MS-Pachyderm

Start-to-end LC-MS-analysis workflow definition on Pachyderm
Shell
5
star
11

ptp-project

Project Source Code Repository for the project "Predicting Off-Target Binding Profiles with Confidence using Conformal Prediction"
TeX
5
star
12

dl_quantmap

Deep learning implementation of quantmap method
Jupyter Notebook
5
star
13

SCPRegression

Code for Synergy Conformal Prediction for Regression
Python
5
star
14

urisolve

A simple web server enabling resolving RDF URIs based on data in a RDF HDT file, or a SPARQL endpoint
Go
5
star
15

bioimg-sciluigi-casestudy

An automated virtual machine setup, containing a use case for running workflows written in SciLuigi
Python
4
star
16

robotlab-labrobots

Web server to our LiCONiC incubator and BioTek washer and dispenser
Python
4
star
17

kubeflow-pipelines

Python
3
star
18

pharmbio-web

The Static (Hugo) website for pharmb.io
JavaScript
3
star
19

robot_lab_cameras

Setup for the live stream monitoring cameras of the robot lab
HTML
2
star
20

MTBLS233-Pachyderm

Scalable and reproducible metabolomics preprocessing workflow powered by Pachyderm
2
star
21

big-data_deeplearning

Big data course, Deep learning repo
Jupyter Notebook
2
star
22

clamp

Perl
2
star
23

pharmbio-notebook

Docker containers for interactive notebook environments for rancher cluster
Dockerfile
2
star
24

cplogd

Code related to the conformal prediction log D project
CSS
2
star
25

robot-imager

IMX imaging using the PreciseFlex robot arm and LiCONiC fridge
Python
2
star
26

big-data_course

Material for the Big Data in life science course
TeX
2
star
27

robot-cellpainter

Cell painting using the UR robot arm
Python
2
star
28

scipipe-demo

Demonstrator workflows for the SciPipe paper in GigaScience
Go
2
star
29

kensert_CNN

Jupyter Notebook
2
star
30

covid19-ptp

Predicted Target Profile towards proteins of interest for Covid-19
Go
1
star
31

mdr

Portal for multi-drug resistant bacteria
Perl
1
star
32

nondisc-acp

Aggregated Conformal Prediction on non-disclosed dataset
CSS
1
star
33

incubator-automation

incubator-automation
Python
1
star
34

PB-seq_2019_L9_machine_learning

1
star
35

pbcharts

Chart repository for Helm
Smarty
1
star
36

shaker-robot

Shaker robot modifications and code
Python
1
star
37

helm-charts

Mustache
1
star
38

kensert_rf_sparse

Python
1
star
39

labrobots-restserver-washer-dispenser

This repo is replaced with https://github.com/pharmbio/robotlab-labrobots and will be archived or deleted.
Python
1
star
40

ai4dd

Material for the course AI for drug discovery
Jupyter Notebook
1
star
41

KT_LUPI

Knowledge transfer LUPI
Python
1
star
42

cplogd-v2.0

cpLodD version 2.0 - using ChEMBL v33
Jupyter Notebook
1
star
43

nw-cp

A master thesis on using Graph Neural Networks and Network Analysis approach in morphological profiling of chemical perturbated cells
HTML
1
star
44

assay-transition-study

Code used for running the experiments of the Assay transition study
Java
1
star