percyfal/snakemakelib

This repository has been archived on 27/May/2022
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Python
License
MIT License
Created about 10 years ago
Updated almost 9 years ago

percyfal/snakemakelib

percyfal

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Snakemake library for bioinformatics programs, with a focus on next-generation sequencing

ratatosk

snakemake-rules

Library of snakemake rules.

slurm

Cookiecutter for snakemake slurm profile

biomake

Makefile library for bioinformatics programs, with a focus on next-generation sequencing

pytest-ngsfixtures

pytest fixtures for next generation sequencing applications

cookiecutter-reproducible-ngs

A cookiecutter template for reproducible research, tailored for use with next-generation sequencing projects

tswf

Whole genome tree sequence analyses

bokehutils

Utility functions and wrappers for generating ggplot-like plots with bokeh

pgip-exercises

Population Genomics in Practice - tutorials and exercises

manticore

R utility functions for dealing with vcf data with a focus on analysis of non model organisms

nbis-project-admin

NBIS project administration utilities

cookiecutter-nbis-project

cookiecutter for NBIS projects