pablo-genomes-to-vials-cruz/myCORASON

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Perl
Created over 4 years ago
Updated over 2 years ago

pablo-genomes-to-vials-cruz/myCORASON

pablo-genomes-to-vials-cruz

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An alternative Version of corason with better phylogenetic trees and other features, flexible and tweakeale, for in house running, less dependencies

download_genomes.sh

A bunch of scripts to download genomes (contigs, genes, proteomes) from the genbank ftp, a OsX compatible (it has some different bash commands :S) version included

blastin.pl

A simple script to run blast in multiple genomes and pull and pool the sequences in a file

fun-git

A set of tools to take fungal genomes mine them for natural products, compare them using phylogenomics, cores, pangenomes. Fun As in Fungi