oskarvid/snakemake-intro oskarvid/snakemake-intro

  • Stars
    star
    1
  • Language Roff
  • Created almost 6 years ago
  • Updated about 4 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
oskarvid/snakemake-intro
github

oskarvid

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

An introduction to Snakemake with simple examples of central snakemake features

More Repositories

1

wdl_germline_pipeline

development location for a wdl based germline pipeline with scatter gather parallelization
WDL
6
star
2

Selma

Germline Variant Calling Pipeline built in Snakemake
Shell
4
star
3

accu-chek-mobile

Snakemake pipeline for graph generation of blood glucose measurements over time
R
4
star
4

terra-ble

Terraform and Ansible libraries and documentation
HCL
2
star
5

ansible-pxe-setup

Simple playbook to setup a PXE boot server
1
star
6

happy-snake

Run hap.py with snakemake
Shell
1
star
7

ServerLoad

A simple server load bash and R script for graphing CPU, disk and RAM usage
R
1
star
8

tr3s

Experimental compute job scheduler
Shell
1
star
9

nextflow-GermlineVarCall

Location for a NextFlow implementation of a GATK best practices pipeline
Nextflow
1
star