Discover nstrayer/phewasHelper Open Source project

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Created almost 5 years ago
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A package with a few tiny helper functions to make life easier to work with phewas and phecodes.

datadrivencv

R package for building customizable CVs from spreadsheets

575

My CV built using RMarkdown and the pagedown package.

HTML

523

shinysense

A bunch of shiny modules that let shiny sense the world around it.

JavaScript

204

tuftesque

HTML

tuftesque2

A successor to the tuftesque blogdown theme. This time starting out as a rmarkdown theme.

CSS

D3ManhattanPlots

An R HTMLWidget for making interactive manhattan plots for GWAS.

JavaScript

spell_casts

A shiny app for casting spells using deep learning

js4shiny_r2d3

Repo for R2D3 section at the javascript for shiny users workshop at RStudio::Conf 2020

JavaScript

shinyswipr

An R Shiny module to put swiping interfaces in your app!

JavaScript

nstrayer.github.io

Personal website

HTML

network3d

Three dimensional network visualization in R using webgl/threejs. Built to be configurable and fast.

HTML

slid3r

A simple d3 slider that is meant to be placed inside your svg.

JavaScript

grided

A web-app to help you build grid-layouts for your web-app

TypeScript

manhattanPlotr

A tiny package that just makes nice looking interactive manhattan plots for use in Shiny apps or publication.

JavaScript

visualization_in_r

A repository for the computing workshop I am giving in the Vanderbilt biostatistics department May 20.

HTML

mcmcDemo

A pure javascript implementation of a metropolis haystings mcmc sampler

JavaScript

cvdown

R package for building data-driven CVs/ Resumes with RMarkdown/Pagedown

activity_detection_post

Can we use Keras to detect human activity from accelerometer data?

HTML

neural_nets_for_statisticians

A series of two lectures for the class Advanced Statistical Inference at Vanderbilt on Neural Networks

HTML

bipartiteNetwork

A 3-d gpu-powered bi-partite network visualization tool. For use in shiny or static environments. Fast.

JavaScript

travelingSalesman

A tiny interactive that allows you to fiddle with the simulated annealing algorithm

JavaScript

statdists

A javascript library mocking R's distribution forms

JavaScript

shinyearr

This package has been rolled into the library shinysense!

JavaScript

wildfires

Where are wildfires happening?

JavaScript

tree-town-trees

A shiny app to explore all of Ann Arbor's trees

rstudioconf19_me-poster

Repo containing the flexdashboard e-poster on the shiny app Multimorbidity Explorer for RStudio::Conf 2019

HTML

d3Stats

A d3 javascript library that will allow easy generation of common statistical plots (scatter, box, violin, histogram... etc.).

JavaScript

Mysis_DVM_Modeling

The code and brainstorms for my senior thesis project "Modeling the Diel Vertical Migration Patterns of Mysis diluviana."

HTML

js_stat_snippets

Small copy and pasteable snippets of common statistics/probability functions in ES6 javascript.

viewr_imagenet_demo

A demo of using the shinyviewr function in my shinysense package to classify photos using the VGG50 imagenet model.

tsne_presentation

Vanderbilt biostatistics journal club paper presentation on T-SNE by Maaten et al.

HTML

associationsubgraphs

Estimation of association networks using non-parametric entropy-based measures

network_builder

A small javascript tool to build toy networks and export them for use in your favorite network program.

HTML

math295

Code and data for Professor James Bagrow's, Math 295 (Data Science 2) at UVM, F14

Python

marketStory

Exploration of state level farmers market trends.

JavaScript

deeplearnjs

JavaScript

pyrtree

Automatically exported from code.google.com/p/pyrtree

Python

pyshiny-output-binding-example

Simple example demonstrating a custom output binding using the Tabulator JS library

JavaScript

py-shiny-custom-input-component

Example for a custom javascript input for a shiny for python in package form

JavaScript

dataDayTexas

Presentation for my talk at Data Day Texas on Jan 27, 2018

HTML

sequence_classification

A presentation I'm making for my qualifying exam on using deep learning for sequence classification

HTML

biSBMR

A quick R implementation of the Bipartite SBM by Dan Larremore, Abigail Jacobs, and Aaron Clauset. Currently just their code pretty much wholesale.

C++

likelihood

A interactive explanation of likelihood functions/ ratios/ intervals.

JavaScript

sbmrcpp

Experimental new version of sbmR package that forgoes the rcpp s4 class in favor of lightweight wrappers of the built in SEXP classes

C++

brimr

A quick implementation of the BRIM algorithm for bipartite network clustering. May eventually be a package.

docker_for_biostatisticians

Slides and demo for Vanderbilt computing seminar on 4/26/2019

HTML

distributionTool

Little app to visualize different probability distributions and play around with their parameters.

JavaScript

nviz

A collection of random visualizations I find myself reusing a lot

ehr_mining_presentation

HTML

binomialFun

An interactive exploration of binomial confidence interval generation and hypothesis testing.

JavaScript

leapD3

Experimental repo interfacing leap motion and d3 graphics.

JavaScript

chromebookDevSetup

A simple set of steps to go from fresh chromebook to active dev environment

bayesian_nonparametrics_tutorial

A series of scripts that implement common bayesian nonparametric unsupervised learning methods from scratch. Will eventually be a blog post.

WebComponentCheatSheet

A series of code snippets to make getting webcomponents up and running easier

hiking_maps

3d hiking maps from Strava

journal_club_bipartite_sbm_larremore_et_al

My slides for the Vandy biostats journal club on Efficiently inferring community structure in bipartite networks by Daniel B. Larremore, Aaron Clauset, and Abigail Z. Jacobs.

HTML

chromebookTesting

Testing the ability to run an entire multifile webdev project from a stock chromebook.

HTML

nstrayer/phewasHelper

nstrayer

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