nstrayer/journal_club_bipartite_sbm_larremore_et_al

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nstrayer/journal_club_bipartite_sbm_larremore_et_al

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My slides for the Vandy biostats journal club on Efficiently inferring community structure in bipartite networks by Daniel B. Larremore, Aaron Clauset, and Abigail Z. Jacobs.

datadrivencv

R package for building customizable CVs from spreadsheets

cv

My CV built using RMarkdown and the pagedown package.

shinysense

A bunch of shiny modules that let shiny sense the world around it.

tuftesque

A very similar style to the original tufte hugo theme but with a few modifications. Used in my blogdown blog.

tuftesque2

A successor to the tuftesque blogdown theme. This time starting out as a rmarkdown theme.

D3ManhattanPlots

An R HTMLWidget for making interactive manhattan plots for GWAS.

spell_casts

A shiny app for casting spells using deep learning

js4shiny_r2d3

Repo for R2D3 section at the javascript for shiny users workshop at RStudio::Conf 2020

shinyswipr

An R Shiny module to put swiping interfaces in your app!

nstrayer.github.io

Personal website

network3d

Three dimensional network visualization in R using webgl/threejs. Built to be configurable and fast.

slid3r

A simple d3 slider that is meant to be placed inside your svg.

grided

A web-app to help you build grid-layouts for your web-app

manhattanPlotr

A tiny package that just makes nice looking interactive manhattan plots for use in Shiny apps or publication.

visualization_in_r

A repository for the computing workshop I am giving in the Vanderbilt biostatistics department May 20.

mcmcDemo

A pure javascript implementation of a metropolis haystings mcmc sampler

cvdown

R package for building data-driven CVs/ Resumes with RMarkdown/Pagedown

activity_detection_post

Can we use Keras to detect human activity from accelerometer data?

neural_nets_for_statisticians

A series of two lectures for the class Advanced Statistical Inference at Vanderbilt on Neural Networks

bipartiteNetwork

A 3-d gpu-powered bi-partite network visualization tool. For use in shiny or static environments. Fast.

travelingSalesman

A tiny interactive that allows you to fiddle with the simulated annealing algorithm

statdists

A javascript library mocking R's distribution forms

phewasHelper

A package with a few tiny helper functions to make life easier to work with phewas and phecodes.

shinyearr

This package has been rolled into the library shinysense!

wildfires

Where are wildfires happening?

tree-town-trees

A shiny app to explore all of Ann Arbor's trees

rstudioconf19_me-poster

Repo containing the flexdashboard e-poster on the shiny app Multimorbidity Explorer for RStudio::Conf 2019

d3Stats

A d3 javascript library that will allow easy generation of common statistical plots (scatter, box, violin, histogram... etc.).

Mysis_DVM_Modeling

The code and brainstorms for my senior thesis project "Modeling the Diel Vertical Migration Patterns of Mysis diluviana."

js_stat_snippets

Small copy and pasteable snippets of common statistics/probability functions in ES6 javascript.

viewr_imagenet_demo

A demo of using the shinyviewr function in my shinysense package to classify photos using the VGG50 imagenet model.

tsne_presentation

Vanderbilt biostatistics journal club paper presentation on T-SNE by Maaten et al.

associationsubgraphs

Estimation of association networks using non-parametric entropy-based measures

network_builder

A small javascript tool to build toy networks and export them for use in your favorite network program.

math295

Code and data for Professor James Bagrow's, Math 295 (Data Science 2) at UVM, F14

marketStory

Exploration of state level farmers market trends.

deeplearnjs

pyrtree

Automatically exported from code.google.com/p/pyrtree

pyshiny-output-binding-example

Simple example demonstrating a custom output binding using the Tabulator JS library

py-shiny-custom-input-component

Example for a custom javascript input for a shiny for python in package form

dataDayTexas

Presentation for my talk at Data Day Texas on Jan 27, 2018

sequence_classification

A presentation I'm making for my qualifying exam on using deep learning for sequence classification

biSBMR

A quick R implementation of the Bipartite SBM by Dan Larremore, Abigail Jacobs, and Aaron Clauset. Currently just their code pretty much wholesale.

likelihood

A interactive explanation of likelihood functions/ ratios/ intervals.

sbmrcpp

Experimental new version of sbmR package that forgoes the rcpp s4 class in favor of lightweight wrappers of the built in SEXP classes

brimr

A quick implementation of the BRIM algorithm for bipartite network clustering. May eventually be a package.

docker_for_biostatisticians

Slides and demo for Vanderbilt computing seminar on 4/26/2019

distributionTool

Little app to visualize different probability distributions and play around with their parameters.

nviz

A collection of random visualizations I find myself reusing a lot

ehr_mining_presentation

binomialFun

An interactive exploration of binomial confidence interval generation and hypothesis testing.

leapD3

Experimental repo interfacing leap motion and d3 graphics.

chromebookDevSetup

A simple set of steps to go from fresh chromebook to active dev environment

bayesian_nonparametrics_tutorial

A series of scripts that implement common bayesian nonparametric unsupervised learning methods from scratch. Will eventually be a blog post.

WebComponentCheatSheet

A series of code snippets to make getting webcomponents up and running easier

hiking_maps

3d hiking maps from Strava

chromebookTesting

Testing the ability to run an entire multifile webdev project from a stock chromebook.