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ngs
Next generation sequencing (NGS/HTS) tools.py-ard
HLA ARD Reduction in Pythondash
Data Standards Hackathon for NGS based typing.flow
Consensus assembly and variant calling workflow.igloader
HL7® FHIR® implementation guide uploader (from IGPack tarfile).gfe-db
Graph database representing IPD-IMGT/HLA sequence data as GFEgrimm
GRIMM: Graph IMputation and Matching for HLA Genotypespipeline
Consensus assembly and allele interpretation pipeline.phycus
Service used for curation of Haplotype Frequencyact-service
Allele Calling Tool (ACT)seq-ann
Python package for doing fast and accurate sequence annotationmultiple-allele-code
Services and libraries for handling multiple allele codes and IMGT/HLA nomenclatureflow-OptiType
Use nextflow to run BAM files through OptiTypeBRIDGModel2Graph
BRIDG Model by version used to populate a Graph Database.CIWD
CIWD data in computable formservice-epitope
T-cell epitope group matching service for HLA-DPB1 locusimgt_biosqldb
The IMGT/HLA sequence data persisted in a BioSQL databasehml
Histoimmunogenetics Markup Language (HML).imgt2aa
extract aligned amino acid sequences from IMGT/HLAgfe-service
GFE Webservice: Provides REST endpoints to GFE related functionshml-fhir-app
HML to FHIR Conversion Applicationmiring-validator
Semantic Validator for MIRING-compliant HMLflow-validation
Validation workflow.py-graph-imputation
Graph ImputationMiHAIP
genotype-list
Genotype List service, client library, and command line tools.hla-reporting-ig
FHIR Implementation Guide for HLA reportingservice-feature
Enumerated sequence feature service.gfe-docker-compose-app
GFE service and GFE Database Docker ComposeGFE
Gene Feature Enumeration for polymorphic genestarr2fhir
Convert tarr2fhir Sync4Genes - Versiti and GenDxhml-validation-portal
Portal for HML validationservice-hml-fhir-converter
Mid level API to handle web-hmlFhirAngularClientact-client
Python client for working with the ACT servicedocker-validation
Docker container for the validation workflow.service-hml
HML service.py-grimm
py-gfe
Python package for creating GFE notation from annotated sequencescytoscape-donor-cluster
An implementation of the cytoscape.js network diagram applied to a donor search that was fitted with a SVM modelflow-GFE
Run fasta files through GFE with nextflownmdp-bioinformatics.github.io
Organization Website for NMDP Bioinformaticsihiw-pedigree-sim
Simulation of ambiguous HLA typing data inherited within family pedigrees for 18th IHIW Projectflow-blast-hml
nextflow pipeline for extracting, blasting and validating all consensus sequences found in an HML file.web-hml-fhir-converter
Client Application To Create HL7-Fhir messages with a base of HMLLove Open Source and this site? Check out how you can help us