nipy/nidoodles

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Python
Created about 14 years ago
Updated about 14 years ago

nipy/nidoodles

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Work-in-progress notes and code fragments for the nipy projects

nipype

Workflows and interfaces for neuroimaging packages

nibabel

Python package to access a cacophony of neuro-imaging file formats

nipy

Neuroimaging in Python FMRI analysis package

nitime

Timeseries analysis for neuroscience data

PySurfer

Cortical neuroimaging visualization in Python

heudiconv

Flexible DICOM conversion into structured directory layouts

mindboggle

Automated anatomical brain label/shape analysis software (+ website)

pbrain

Python EEG and ECoG analysis software by John Hunter et al

niwidgets

Neuroimaging widgets for jupyter notebooks

Jupyter Notebook

brainx

Tools for analysis of brain imaging-derived networks, based on NetworkX

nireg

Brain image registration package

nitransforms

a standalone fork of nipy/nibabel#656

nilabels

Tools to automate simple manipulations and measurements of medical images and segmentations in nifti format.

dmriprep

MOVED TO https://github.com/nipreps/dmriprep

workshops

Brain imaging workshops

Jupyter Notebook

quickshear

Quickshear Defacing for Neuroimages

nibotmi

NIPY BuildBot Master Instance

nipy-artwork

Fliers, images, etc

nipy.github.io

Main website for the Neuroimaging in Python community

PyLocator

Localization of EEG-electrodes from MRI-recordings

nipy-suite

Meta-project to provide a single point of getting/testing for all projects under NiPy umbrella

data-packaging

Utilities for managing data packages

napari-nibabel

A napari plugin that uses nibabel to display medical images

nipyco

Nipy community web pages

heudiconv-joss-paper

Repository to prepare HeuDiConv paper

nipy-labs

Work-in-progress add-ons for nipy (require lapack)

blog

nisext

Shareable distutils etc utilities

nibabel-paper

Journal manuscript for the initial publication of NiBabel