Discover nhsx/skunkworks Open Source project by NHSX (@nhsx)

The COVID Pass Verifier app is the official NHS COVID Pass Verifier for England and Wales. NHS COVID Pass Verifier app is a secure way to scan an individual’s NHS COVID Pass and check that they have been fully vaccinated against COVID-19, had a negative test, or have recovered from COVID-19.

covid-pass-verifier

open-source-policy

Open Source Policy development for the NHS

SynthVAE

Synthetic data generation by a Variational AutoEncoder with Differential Privacy assessed using Synthetic Data Vault metrics

NHSX Website - built with Wagtail

nhsx-website

Web application for finger prick covid19 antibody Lateral Flow Tests (LFT) and interpreting results

antibody-web

TypeScript

open-source-fhir-server

Open source fhir server

NHS AI Lab Skunkworks project: Long Stayer Risk Stratification

skunkworks-long-stayer-risk-stratification

A pipeline for generating and evaluating synthetic data generation models. Currently using SynthVAE to demonstrate functionality. Read more about the project here: https://nhsx.github.io/skunkworks/synthetic-data-pipeline

skunkworks-synthetic-data

A curated list of algorithms and datasets. All content hosted elsewhere. NHSX is not responsible for the contents of external links.

algorithm-library

skunkworks-bed-allocation

NHS AI Lab Skunkworks project: Bed Allocation

SCSS

nhs_time_of_travel

This GitHub repository and accompanying webpage contain the initial proof of concept and exploratory analysis for the design of a holistic and interactive mapping tool to support decision-making in health and social care.

⚠️ This repository has been deprecated and is now read only

old-nhsx-website

NHS England PhD Internship Projects Pages

nhsx-internship-projects

NHS AI Lab Skunkworks’ project: Data Lens

skunkworks-data-lens

Proof Of Concept - Open Patient Pathway Generator using and an agent based approach

SynPath

Baseline models for predicting Length of Stay

skunkworks-long-stayer-risk-stratification-baseline

The NHS App dashboard enables you to see how many patients are using the NHS App across England, and which features they are using. It can be accessed by anyone with an NHS email address.

nhs-app-analytics-dashboard

ai-dictionary

Prototype AI Dictionary from the NHS AI Lab

Cleaning pipeline for the the National COVID-19 Chest Imaging Database (NCCID) clinical data.

nccid-cleaning

HSMA4 project - Discrete Event Simulation - The role of Patient Initiated Follow-up in supporting the elective recovery in rheumatology

HSMA4-12-DES-rheum

Automatic segmentation and detection of Parkinson’s disease pathology using synthetic staining and deep neural networks

skunkworks-parkinsons-detection

NHSX AU-Data Engineering - Tableau Analytics

au-tableau-analytics

TSQL

stm-survey-text

Structural Topic modelling Code to gain insights from free text responses to NHS surveys and their associated metadata

au-azure-databricks

NHSX AU-Data Engineering - Azure Databricks Analytics

NHS.UK themed template for open analytics projects

open-analytics-template

ELM4PSIR - Exploring Language Modelling for (NHS) Patient Safety Incident Reports - DART PhD Internship Project

ELM4PSIR

Terraform templates for deploying all the necessary cloud infrastructure to run an external validation of an AI model.

nccid-validation-infrastructure

HCL

open-source-imaging-data-sets

Repository of open source imaging data sets

What we'll do, are doing, have done

AnalyticsUnit

Data Science Internship Scheme project investigating if a LIME application using superpixels is appropriate for facial healthcare image classification

LIME-XAI-Facial-Disease-Classification

NHS AI Lab Skunkworks project: CT Alignment and Lesion Detection

skunkworks-ct-alignment-lesion-detection

Investigation of the value of commercial sales data on respiratory death predictions using Model Class Reliance

Mental-Health

commercial-data-healthcare-predictions

The service powering the NHS standards directory

standards-registry

Repository for Hypergraph Animations and the Hypergraphs for Multimorbidity streamlit App

hypergraphical

Design prototypes for the NHSX website

nhsx-prototype

NHSX AU-Data Engineering - Documentation

au-data-engineering

au-azure-databricks-cicd

NHS England and NHS Improvement AU-Data Engineering - Azure Databricks Analytics

A tool to find optimal nursing student placement schedules, applying a genetic algorithm to explore the problem space.

skunkworks-nursing-placement-schedule-optimisation

Digital Transformation Technology team public git repo, mainly hosting architecture as code Plant UML diagrams and other public resources.

dt-public

Job opportunities at NHSx

we-are-hiring

skunkworks-adrenal-lesions-detection

Detecting adrenal lesions in CT scans using a 2.5D deep learning model.

Exploring geographic usage of Patient Online services [In Development]

patient-online-mapping

Admit me proof of concept software

admitme

Academic publications from NHSX projects

nhsx-publications

Exploring contrastive alignment of image and text encoders for image-based radiology report retrieval and generation, and identification of possible evaluation metrics

txt-ray-align

A framework built to perform the multi-morbidity hypergraph calculations, completed as part of the DART PhD Internship Scheme working with the SAIL DataBank

hypergraph-mm

A webpage giving select headline stats on cybersecurity compliance in healthcare organisations

open-cyber

NHS England International Patient Summary

international-patient-summary

TypeScript

il-keebd

USB-OTG keyboard daemon for raspberry pi

Methodology to calculate impact of aging population on activity forecasts

transform

NHS-Language-Corpus

⚠️ This repository has been deprecated and is now read only. NHSX PhD Internship Projects are now available here - https://github.com/nhsx/nhsx-internship-projects

standards-registry-discovery

Materials and associated code for privacy of unstructured text calculation

PrivacyFingerprint

self-isolation-prototype

DNAttend - Experimental ML framework for predicting patient non-attendance

dna-risk-predict

NHS Language Corpus Tools - Discovery

language-corpus-tools

digital-health-insights

Digital Health Insights

Time_Series_Forecasting_MS

online-services-demographic-modelling

In Develeopment

digitisation-index

SynPath module for generating type 2 diabetes pathway

SynPath_Diabetes

Codebase for descriptive statistics on A&E activity among care home patients.

ASC_EC_characterisation_codebase

TSQL

eLfH-PHM-RiskStrat

A worked example to support the e-Learning for Health (e-LfH) PHM Risk Stratification Module.

skunkworks-template

Template for publication of skunkworks projects

data-lens-query-validator

Check if data related query returns correct URL in search results

Writeup of the build of a prototype phone scanner

il-magic-scanner

⚠️ This repository has been deprecated and is now read only. NHSX PhD Internship Projects are now available here - https://github.com/nhsx/nhsx-internship-projects

Exploring-data-representations

morbidity_network_analysis

⚠️ This repository has been deprecated and is now read only. NHSX PhD Internship Projects are now available here - https://github.com/nhsx/nhsx-internship-projects

Synthetic-Data-Exploration-Probabilistic-Graphical-Models

social-care-connectivity-devices

NHSX led programme to procure and gift 11,000 (data-enabled) iPads to care homes in response to COVID-19.

diabetes-inequalities

ESNEFT Analysis - Diabetes Inequalities, part of a DART PhD Internship Project on Inequalities in Population Health Data with a focus on Diabetes