nextflow-io/nf-wr

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Language
Groovy
License
Apache License 2.0
Created almost 4 years ago
Updated almost 2 years ago

nextflow-io/nf-wr

nextflow-io

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WR extension module for Nextflow

nextflow

A DSL for data-driven computational pipelines

awesome-nextflow

A curated list of nextflow based pipelines

patterns

A curated collection of Nextflow implementation patterns

training

Nextflow training material

rnaseq-nf

A proof of concept of RNAseq pipeline

nf-validation

Params validation plugin for Nextflow pipelines

nf-hack17-tutorial

Nextflow basic tutorial for newbie users

rnatoy

A proof of concept RNA-Seq pipeline with Nextflow

nfcamp-tutorial

A tutorial for DLS-2 migration

cwl2nxf

Import a CWL workflow specification to Nextflow script (experimental)

vscode-language-nextflow

Nextflow language support for Visual Studio Editor

crg-course-nov16

Nextflow + Docker tutorial material

nf-sqldb

SQL support plugin for Nextflow

nf-hack18

Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/

nf-prov

hello

Classic hello world script in Nextflow language

hyperopt

Nextflow pipeline for hyperparameter optimization of machine learning models

nf-hack17

Nextflow hackathon 2017 projects

rmghc-2018

Nextflow Workshop at Rocky Mountain Genomics HackCon 2018

nf-ffq

Proof of concept of a Nextflow plugin to fetch fastq samples via ffq

blast-example

A basic blast pipeline using nextflow

atom-language-nextflow

Nextflow syntax highlighter for Atom editor

gccbosc18-training

Documentation for Nextflow training at GCC/BOSC 2018

website

Nextflow public web site

nf-hello

Nextflow plugin implementation skeleton

socks

nextflow run socks

nf-quilt

Quilt plugin for Nextflow

vscode-dag-preview

Experimental VSCode plugin rendering Nextflow execution DAG

nf-sraql

Tentative Nextflow plugin for AWS Athena and Google Bigquery

elixir-workshop-21

Nextflow workflow workshop 2021

nf-recursion

Showcase repository for Nextflow recursion

tests

faq

Nextflow frequently asked questions

nf-azure

Azure cloud plugin for Nextflow

nxf-tes-java-client

Experimental TES API client

nf-co2footprint

[WIP] A Nextflow plugin to estimate the CO2 footprint of pipeline runs.

nf-tweet

Proof of concept plugin showing how to implement Nextflow plugin interacting with a foreign API

trademark

Nextflow logo & trademark policy

.github

nf-kafka

nextflow plugin for events subsystems

nf-amazon

Amazon Web Services plugin for Nextflow

nxf-httpfs

flowata

nf-wave

Wave provisioning containers plugin for Nextflow

summit-website

nf-legacy-cloud

Legacy cloud support for Nextflow pipeline system

nf-ignite