natir/biommap

Stars
3
Rank 3,963,521 (Top 79 %)
Language
Rust
License
MIT License
Created almost 2 years ago
Updated almost 2 years ago

natir/biommap

natir

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A vcf parser that use memory mapping to get high performance.

yacrd

Yet Another Chimeric Read Detector

fpa

Filter of Pairwise Alignement

rustyread

A long read simulator based on badread idea

Jupyter Notebook

vcf2parquet

Convert vcf in parquet

nuc2bit

Redirector_doi_sci-hub

Redirector rules to convert any sci-hub link or doi link to valid sci-hub domaine.

variantplaner

A tool kit to manage many variant on desktop computer

fastx

bench_rev_comp

ragroc

A webapp to generate random dna and perform reverse complement

cocktail

fbio

Friday's BioInformatics Optimizations

ned-et-les-maki

snakemake_ba

Snakemake Benchmark Analysis

in_place_fastx

knot

KNOT: Knowledge Network Overlap exTraction is a tool for the investigation of fragmented long read assemblies.

blog

ncovfrost

mapping2barcode

sequence_back

copier-rust

Rust copier template

thesis

kmrf

Kmer base Read Filter

set_count

dna_mix

tr_gfa

map2dotplot

linktree

A json configurable linktree.

fast_bench

copier-yew

crazyqc

cabanis

etc

yacrd_RNA

Jupyter Notebook

ovide

br

Brutal Rewrite a long read corrector

project-diploid-assembly-UAB-graph-analysis

igusharray

cam_bot

lcd

pcon

copier-python

pcon_kmrf

page_perso