moshi4/GBKviz moshi4/GBKviz

  • This repository has been archived on 18/Feb/2023
  • Stars
    star
    16
  • Rank 1,303,985 (Top 26 %)
  • Language
    Python
  • License
    MIT License
  • Created almost 3 years ago
  • Updated over 2 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
moshi4/GBKviz
github

moshi4

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Easy-to-use web application for visualization and comparison of genomes in Genbank file

More Repositories

1

pyCirclize

Circular visualization in Python (Circos Plot, Chord Diagram)
Python
384
star
2

pyGenomeViz

A genome visualization python package for comparative genomics
Python
152
star
3

pyMSAviz

MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
Python
36
star
4

ANIclustermap

A tool for drawing ANI clustermap between all-vs-all microbial genomes
Python
33
star
5

MGCplotter

Microbial Genome Circular plotting tool for comparative genomics using Circos
Python
26
star
6

COGclassifier

A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category
Python
20
star
7

plot_genome_align_fig

Plot genome alignment figure using progressiveMauve & genoPlotR
Python
16
star
8

CafePlotter

A tool for plotting CAFE5 gene family expansion/contraction result
Python
10
star
9

FastDTLmapper

Genome-wide gene gain/loss mapping tool using DTL(Duplication-Transfer-Loss) reconciliation method
Python
9
star
10

pycirclize-data

pyCirclize data repository
1
star