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hypeR
An R Package for Geneset Enrichment Workflowspipeliner
A flexible Nextflow-based framework for the definition of sequencing data processing pipelinesnf-gwas-pipeline
A Nextflow Genome-Wide Association Study (GWAS) PipelineCaDrA
Candidate Drivers Analysis: Multi-Omic Search for Candidate Drivers of Functional SignaturesBS831
Course Materials for Genomics Data Miningbands
Simple interactive chromosome maps written in RiEDGE
integrative analysis of (epi-)DNA and gene expression data for the identification of candidate cancer driversshine
Structure Learning for Hierarchical Networksppi-context
Contextualization of protein-protein interaction databases by cell lineK2Taxonomer
A tool for the multi-resolution characterization of molecular taxonomies in bulk and single-cell omics dataOmicSignature
pipeliner-2
Pipeliner upgraded for Nextflow DSL2 modulesXposome
Chemical Screenings using high-throughput transcriptomics assaysConAn
Resampling-Based Differential Network Connectivity AnalysisSigRepoR
knnmi
k-nearest neighbor mutual information estimatorProteomicsSignaturesCentenarians
Analysis scripts associated to Sebastiani et al., Aging Cell 20(2):e13290, 2021netviz
A Shiny Application for Visualization and Analysis of Networksvennr
Area proportional venn and euler diagrams through venn.jshypeR-workshop
Efficient, Scalable, and Reproducible Enrichment Workflowsshine-nf
A Collection of Nextflow Modules for Bayesian Structure Learningbieulergy
Interactive analysis of multi-omics regulatory networksevalGSVAsig
Evaluate genes driving signatureLove Open Source and this site? Check out how you can help us