montilab/K2Taxonomer montilab/K2Taxonomer

  • Stars
    star
    4
  • Rank 3,304,323 (Top 66 %)
  • Language
    R
  • License
    GNU General Publi...
  • Created almost 5 years ago
  • Updated 7 months ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
montilab/K2Taxonomer
github

montilab

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

A tool for the multi-resolution characterization of molecular taxonomies in bulk and single-cell omics data

More Repositories

1

hypeR

An R Package for Geneset Enrichment Workflows
R
75
star
2

pipeliner

A flexible Nextflow-based framework for the definition of sequencing data processing pipelines
Nextflow
44
star
3

nf-gwas-pipeline

A Nextflow Genome-Wide Association Study (GWAS) Pipeline
R
30
star
4

CaDrA

Candidate Drivers Analysis: Multi-Omic Search for Candidate Drivers of Functional Signatures
R
24
star
5

BS831

Course Materials for Genomics Data Mining
HTML
20
star
6

bands

Simple interactive chromosome maps written in R
R
7
star
7

iEDGE

integrative analysis of (epi-)DNA and gene expression data for the identification of candidate cancer drivers
R
6
star
8

shine

Structure Learning for Hierarchical Networks
R
4
star
9

ppi-context

Contextualization of protein-protein interaction databases by cell line
Python
4
star
10

OmicSignature

R
3
star
11

pipeliner-2

Pipeliner upgraded for Nextflow DSL2 modules
Nextflow
3
star
12

Xposome

Chemical Screenings using high-throughput transcriptomics assays
R
2
star
13

ConAn

Resampling-Based Differential Network Connectivity Analysis
R
2
star
14

SigRepoR

R
2
star
15

knnmi

k-nearest neighbor mutual information estimator
C++
1
star
16

ProteomicsSignaturesCentenarians

Analysis scripts associated to Sebastiani et al., Aging Cell 20(2):e13290, 2021
R
1
star
17

netviz

A Shiny Application for Visualization and Analysis of Networks
1
star
18

vennr

Area proportional venn and euler diagrams through venn.js
R
1
star
19

hypeR-workshop

Efficient, Scalable, and Reproducible Enrichment Workflows
Dockerfile
1
star
20

shine-nf

A Collection of Nextflow Modules for Bayesian Structure Learning
R
1
star
21

bieulergy

Interactive analysis of multi-omics regulatory networks
R
1
star
22

yQTLpipeline

R
1
star
23

evalGSVAsig

Evaluate genes driving signature
R
1
star