mkanai/ldsc-corrplot-rg

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GNU General Publi...
Created over 5 years ago
Updated over 2 years ago

mkanai/ldsc-corrplot-rg

mkanai

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corrplot of LDSC genetic correlation results

fujiplot

🗻 Fuji plot—a circos representation of multiple GWAS results— 🗻

ldsc-network-plot

Network representation of LDSC results

grimon

R package for plotting 3D graphical visualization of multi-omics data.

mr-forestplot

eas_partitioned_ldscore

Partitioned LD Scores for the EAS population

finemapping-insights

Code for Kanai, M. et al. Insights from complex trait fine-mapping across diverse populations. (2021)

finemapping-pipeline

ggman

R package for plotting a manhattan plot using ggplot2.

WRShd

An Experimental Refactor of the Harrell-Davis Estimate Functions from R. R. Wilcox' Robust Statistics Package WRS https://github.com/nicebread/WRS

locusviz

Yet another locus visualization package in R

minimgnt

A mini subset of the MAGENTA software, reimplemented in Python.

deFinetti

R package for plotting a de Finetti diagram and distributions of F-statistics of genotypes.

slalom

SLALOM (suspicious loci analysis of meta-analysis summary statistics)

GWAS_threshold_scripts

This repository contains the scripts used in Kanai, M. et al. (2016)

rgsutil

A simple gsutil wrapper in R

MAGENTApy

Experimental port of MAGENTA software to Python.

slalom-paper

Code for Kanai, M. et al. Meta-analysis fine-mapping is often miscalibrated at single-variant resolution. (2022)

Jupyter Notebook