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tHMM
A general Python framework for using hidden Markov models on binary trees or cell lineage trees.ps-growth-model
More detailed growth models using inference.mechanismEncoder
Developing patient-specific phosphoproteomic models using mechanistic autoencoderstensorpack
A collection of tensor methods from the Meyer lab.systemsSerology
Dissecting systems serology with a tensor factorizationFcRegression.jl
Study Fc antibody dynamics using a multivalent binding modelscCP
PARAFAC2 for modeling multi-sample single-cell RNAseq.IL4-model
tensor-impute
Explore imputation methods for tensor datagc-cytokines
A binding-reaction model for the common gamma chain receptor cytokines.FcRn-trafficking
Trafficking model of FcRn to explain the effects of failed release at the cell surface.DrugResponseModel.jl
This is to show oscillations in the number of cells in G1 and in G2 phase of cell cycle.gcSolver
C++ solver for the gamma chain cytokinesFcgR-binding
A Multivalent Binding Model for FcgRsanalytic-Pf2
Attempting analytical PARAFAC solving for more accurate PARAFAC2 fitting.asmlab.org
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