mdshw5/simplesam mdshw5/simplesam

  • Stars
    star
    59
  • Rank 506,858 (Top 11 %)
  • Language
    Python
  • License
    MIT License
  • Created over 9 years ago
  • Updated over 2 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
mdshw5/simplesam
github

mdshw5

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Simple pure Python SAM parser and objects for working with SAM records

More Repositories

1

pyfaidx

Efficient pythonic random access to fasta subsequences
Python
411
star
2

fastqp

Simple FASTQ quality assessment using Python
Python
104
star
3

hamstring

Tools for generating and decoding error-correcting DNA barcodes
Python
15
star
4

strandex

Sample an approximate number of reads from a fastq file without reading the entire file
Python
11
star
5

transcoorder

Convert SAM/BAM files with transcript coordinates to SAM files with genomic coordinates
Python
3
star
6

mpmd

Configuration and such for my Monoprice mini delta printer
1
star
7

galaxy-json-data-source

Data source tool for importing multiple datasets using a JSON schema
Python
1
star
8

sra-tools-galaxy

NCBI SRA toolkit Galaxy package and tool wrappers
Python
1
star
9

tripod-web

web application for triPOD detection
Python
1
star