mckennalab/FlashFry mckennalab/FlashFry

  • Stars
    star
    63
  • Rank 484,938 (Top 10 %)
  • Language
    Scala
  • License
    Other
  • Created almost 10 years ago
  • Updated 5 months ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
mckennalab/FlashFry
github

mckennalab

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

FlashFry: The rapid CRISPR target site characterization tool

More Repositories

1

Circuitseq

Nanopore Plasmid Sequencing
JavaScript
30
star
2

SingleCellLineage

Updated scripts and pipelines for processing GESTALT data at single-cell resolution
Scala
19
star
3

TreeUtils

A simple Scala tool to handle running the PHILIP MIX parsimony program and generating JSON output trees
Scala
5
star
4

SciMaul

SCIMaul: A read splitter for single-cell experiments
Scala
4
star
5

gene_146

Code and course material for Gene/QBS 146: Foundations of Bioinformatics I
Jupyter Notebook
3
star
6

SAMToFasta

Convert a SAM and reference files into a paired FASTA alignment file
Rust
2
star
7

gene111

Notebooks and code for Dartmouth's GENE111 class
Jupyter Notebook
2
star
8

custom_barcodes

Generation of custom sequencing barcodes
Scala
2
star
9

DupScoop

Remove duplicate segments from small, circular genome assemblies
Rust
1
star
10

mckennalab.github.io

the rendered version of the website
HTML
1
star
11

clique

Read alignment and collapsing for lineage data
Rust
1
star