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conquer
consistent quantification of external RNA-seq data setsscRNAseq_clustering_comparison
A study to compare methods for clustering of scRNA-seq dataCrispRVariants
diff_splice_paper
Code for differential splicing comparison paper (Soneson, Matthes, et al.)cytofWorkflow
UZH_EpiBiostat_MethodsSeminar_SS2020_DeepLearning
UZH Epi/Biostat Methods Seminar Spring 2020: Deep LearningTreeSummarizedExperiment
An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimensionDAMEfinder
Finds DAMEs - Differential Allelicly MEthylated regionsscRNA_pipelines_paper
benchmarkR
Tools in R for benchmarking methods (generally on a genome-scale)CrispRvariants_manuscript
sc_benchmark_metaanalysis
R scripts for the analysis of a bunch of single cell computational method benchmarksCrispRVariantsLite
Shiny App to accompany CrispRVariants packageos_monitor
treeAGG
R package for inferring aggregation up a treesamanta_cytof_analysis_code
R code for cytof analysis in "Novel pro-inflammatory AGM-associated macrophages are involved in embryonic development of hematopoietic stem cells"2016-07-18-zurich
compgen_rnaseq_2016
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