m-jahn/CRISPRi-lib-pipe

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R
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GNU General Publi...
Created almost 4 years ago
Updated over 2 years ago

m-jahn/CRISPRi-lib-pipe

m-jahn

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Pipeline to process CRISPRi library sequencing data

WeightedTreemaps

Create Voronoi and Sunburst Treemaps from Hierarchical data

fluctuator

R package to Import and Modify SVG (XML) Graphic Files

lattice-tools

Panel functions and wrappers to extend the R lattice universe

genome-scale-models

Genome scale metabolic models in SBML format

TnSeq-pipe

TnSeq data processing workflow

ShinyLib

R Shiny based interface for browsing fitness data from transposon or CRISPRi libraries

ShinyMC

R Shiny based interface for monitoring bioreactors

cell-economy-models

Cellular economy models for simulation of biological optimizaton problems

ShinyProt

R Shiny based browser for gene expression data

R-tools

often used R scripts for bio-informatics work and plotting

R-notebook-crispri-lib

R markdown notebooks for analysis of CRISPR inhibition library data

Jupyter Notebook

openMS-workflows

workflows for openMS using KNIME framework

CV

curriculum vitae

R-notebook-ralstonia-proteome

Pipelines for data analysis and visualization of the Ralstonia proteome

ShinyTreemaps

R Shiny app for easy creation of Voronoi and Sunburst treemaps