lvrcek/NeuralLayout

Stars
10
Rank 1,807,489 (Top 36 %)
Language
Python
License
MIT License
Created about 4 years ago
Updated almost 2 years ago

lvrcek/NeuralLayout

lvrcek

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A GNN model that executes simplification algorithms used in the layout phase of de novo genome assembly process.

GNNome-assembly

Learning to untangle genome assembly with graph neural networks.

advent-of-code-2021

My Advent of Code 2021 solutions in C++

advent-of-code-2020

My Advent of Code 2020 solutions in Python

LongReadClassification

Deep learning model for classifying reads in de novo genome assembly.

assembly_graph_utils

Some basic functions for creating assembly graphs in the DGL format

hifi-simulator

A simulator for PacBio HiFi reads