lucidrains/medical-chatgpt lucidrains/medical-chatgpt

  • Stars
    star
    311
  • Rank 134,521 (Top 3 %)
  • Language
    Python
  • License
    MIT License
  • Created about 2 years ago
  • Updated about 1 year ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
lucidrains/medical-chatgpt
github

lucidrains

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Implementation of ChatGPT, but tailored towards primary care medicine, with the reward being able to collect patient histories in a thorough and efficient manner and come up with a reasonable differential diagnosis

Explorations into training a ChatGPT, but tailored towards primary care medicine, with the reward being able to collect patient histories in a thorough and efficient manner and come up with a differential diagnosis. May also explore to see if it can be further fine-tuned on pirated copies of Up-To-Date for specialist knowledge

Citations

@inproceedings{Singhal2022LargeLM,
    title   = {Large Language Models Encode Clinical Knowledge},
    author  = {Karan Singhal and Shekoofeh Azizi and Tao Tu and Said Mahdavi and Jason Lee Kai Wei and Hyung Won Chung and Nathan Scales and Ajay Kumar Tanwani and Heather J. Cole-Lewis and Stephen J. Pfohl and P A Payne and Martin G. Seneviratne and Paul Gamble and Chris Kelly and Nathaneal Scharli and Aakanksha Chowdhery and P. D. Mansfield and Blaise Ag{\"u}era y Arcas and Dale R. Webster and Greg S. Corrado and Y. Matias and Katherine Hui-Ling Chou and Juraj Gottweis and Nenad Toma{\vs}ev and Yun Liu and Alvin Rajkomar and Jo{\"e}lle K. Barral and Christopher Semturs and Alan Karthikesalingam and Vivek Natarajan},
    year    = {2022}
}
@article {Kung2022.12.19.22283643,
    author  = {Kung, Tiffany H. and Cheatham, Morgan and , and Medenilla, Arielle and Sillos, Czarina and De Leon, Lorie and Elepa{\~n}o, Camille and Madriaga, Maria and Aggabao, Rimel and Diaz-Candido, Giezel and Maningo, James and Tseng, Victor},
    title   = {Performance of ChatGPT on USMLE: Potential for AI-Assisted Medical Education Using Large Language Models},
    elocation-id = {2022.12.19.22283643},
    year    = {2022},
    doi     = {10.1101/2022.12.19.22283643},
    publisher = {Cold Spring Harbor Laboratory Press},
    URL     = {https://www.medrxiv.org/content/early/2022/12/21/2022.12.19.22283643},
    eprint  = {https://www.medrxiv.org/content/early/2022/12/21/2022.12.19.22283643.full.pdf},
    journal = {medRxiv}
}
@misc{https://doi.org/10.48550/arxiv.2301.10035,
    doi     = {10.48550/ARXIV.2301.10035},
    url     = {https://arxiv.org/abs/2301.10035},
    author  = {Nov, Oded and Singh, Nina and Mann, Devin},
    keywords = {Human-Computer Interaction (cs.HC), FOS: Computer and information sciences, FOS: Computer and information sciences},
    title   = {Putting ChatGPT's Medical Advice to the (Turing) Test},
    publisher = {arXiv},
    year    = {2023},  
    copyright = {Creative Commons Attribution Share Alike 4.0 International}
}
@inproceedings{Schick2023ToolformerLM,
    title   = {Toolformer: Language Models Can Teach Themselves to Use Tools},
    author  = {Timo Schick and Jane Dwivedi-Yu and Roberto Dessi and Roberta Raileanu and Maria Lomeli and Luke Zettlemoyer and Nicola Cancedda and Thomas Scialom},
    year    = {2023}
}
@inproceedings{Peng2023CheckYF,
    title     = {Check Your Facts and Try Again: Improving Large Language Models with External Knowledge and Automated Feedback},
    author    = {Baolin Peng and Michel Galley and Pengcheng He and Hao Cheng and Yujia Xie and Yu Hu and Qiuyuan Huang and Lars Lid{\'e}n and Zhou Yu and Weizhu Chen and Jianfeng Gao},
    year      = {2023}
}
@inproceedings{Nori2023CapabilitiesOG,
    title   = {Capabilities of GPT-4 on Medical Challenge Problems},
    author  = {Harsha Nori and Nicholas King and Scott Mayer McKinney and Dean Carignan and Eric Horvitz},
    year    = {2023}
}

More Repositories

1

vit-pytorch

Implementation of Vision Transformer, a simple way to achieve SOTA in vision classification with only a single transformer encoder, in Pytorch
Python
13,633
star
2

DALLE2-pytorch

Implementation of DALL-E 2, OpenAI's updated text-to-image synthesis neural network, in Pytorch
Python
11,068
star
3

imagen-pytorch

Implementation of Imagen, Google's Text-to-Image Neural Network, in Pytorch
Python
7,832
star
4

PaLM-rlhf-pytorch

Implementation of RLHF (Reinforcement Learning with Human Feedback) on top of the PaLM architecture. Basically ChatGPT but with PaLM
Python
7,611
star
5

DALLE-pytorch

Implementation / replication of DALL-E, OpenAI's Text to Image Transformer, in Pytorch
Python
5,132
star
6

deep-daze

Simple command line tool for text to image generation using OpenAI's CLIP and Siren (Implicit neural representation network). Technique was originally created by https://twitter.com/advadnoun
Python
4,387
star
7

denoising-diffusion-pytorch

Implementation of Denoising Diffusion Probabilistic Model in Pytorch
Python
3,959
star
8

stylegan2-pytorch

Simplest working implementation of Stylegan2, state of the art generative adversarial network, in Pytorch. Enabling everyone to experience disentanglement
Python
3,433
star
9

musiclm-pytorch

Implementation of MusicLM, Google's new SOTA model for music generation using attention networks, in Pytorch
Python
3,048
star
10

x-transformers

A simple but complete full-attention transformer with a set of promising experimental features from various papers
Python
2,707
star
11

big-sleep

A simple command line tool for text to image generation, using OpenAI's CLIP and a BigGAN. Technique was originally created by https://twitter.com/advadnoun
Python
2,446
star
12

audiolm-pytorch

Implementation of AudioLM, a SOTA Language Modeling Approach to Audio Generation out of Google Research, in Pytorch
Python
2,285
star
13

lion-pytorch

🦁 Lion, new optimizer discovered by Google Brain using genetic algorithms that is purportedly better than Adam(w), in Pytorch
Python
1,933
star
14

toolformer-pytorch

Implementation of Toolformer, Language Models That Can Use Tools, by MetaAI
Python
1,905
star
15

reformer-pytorch

Reformer, the efficient Transformer, in Pytorch
Python
1,870
star
16

make-a-video-pytorch

Implementation of Make-A-Video, new SOTA text to video generator from Meta AI, in Pytorch
Python
1,853
star
17

gigagan-pytorch

Implementation of GigaGAN, new SOTA GAN out of Adobe. Culmination of nearly a decade of research into GANs
Python
1,632
star
18

alphafold2

To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released
Python
1,536
star
19

lightweight-gan

Implementation of 'lightweight' GAN, proposed in ICLR 2021, in Pytorch. High resolution image generations that can be trained within a day or two
Python
1,526
star
20

lambda-networks

Implementation of LambdaNetworks, a new approach to image recognition that reaches SOTA with less compute
Python
1,516
star
21

byol-pytorch

Usable Implementation of "Bootstrap Your Own Latent" self-supervised learning, from Deepmind, in Pytorch
Python
1,497
star
22

self-rewarding-lm-pytorch

Implementation of the training framework proposed in Self-Rewarding Language Model, from MetaAI
Python
1,253
star
23

naturalspeech2-pytorch

Implementation of Natural Speech 2, Zero-shot Speech and Singing Synthesizer, in Pytorch
Python
1,214
star
24

flamingo-pytorch

Implementation of 🦩 Flamingo, state-of-the-art few-shot visual question answering attention net out of Deepmind, in Pytorch
Python
1,155
star
25

video-diffusion-pytorch

Implementation of Video Diffusion Models, Jonathan Ho's new paper extending DDPMs to Video Generation - in Pytorch
Python
1,141
star
26

soundstorm-pytorch

Implementation of SoundStorm, Efficient Parallel Audio Generation from Google Deepmind, in Pytorch
Python
1,130
star
27

CoCa-pytorch

Implementation of CoCa, Contrastive Captioners are Image-Text Foundation Models, in Pytorch
Python
990
star
28

performer-pytorch

An implementation of Performer, a linear attention-based transformer, in Pytorch
Python
937
star
29

perceiver-pytorch

Implementation of Perceiver, General Perception with Iterative Attention, in Pytorch
Python
935
star
30

RETRO-pytorch

Implementation of RETRO, Deepmind's Retrieval based Attention net, in Pytorch
Python
835
star
31

mlp-mixer-pytorch

An All-MLP solution for Vision, from Google AI
Python
833
star
32

muse-maskgit-pytorch

Implementation of Muse: Text-to-Image Generation via Masked Generative Transformers, in Pytorch
Python
821
star
33

PaLM-pytorch

Implementation of the specific Transformer architecture from PaLM - Scaling Language Modeling with Pathways
Python
812
star
34

vector-quantize-pytorch

Vector Quantization, in Pytorch
Python
810
star
35

phenaki-pytorch

Implementation of Phenaki Video, which uses Mask GIT to produce text guided videos of up to 2 minutes in length, in Pytorch
Python
724
star
36

x-clip

A concise but complete implementation of CLIP with various experimental improvements from recent papers
Python
658
star
37

bottleneck-transformer-pytorch

Implementation of Bottleneck Transformer in Pytorch
Python
632
star
38

memorizing-transformers-pytorch

Implementation of Memorizing Transformers (ICLR 2022), attention net augmented with indexing and retrieval of memories using approximate nearest neighbors, in Pytorch
Python
614
star
39

TimeSformer-pytorch

Implementation of TimeSformer from Facebook AI, a pure attention-based solution for video classification
Python
613
star
40

MEGABYTE-pytorch

Implementation of MEGABYTE, Predicting Million-byte Sequences with Multiscale Transformers, in Pytorch
Python
594
star
41

meshgpt-pytorch

Implementation of MeshGPT, SOTA Mesh generation using Attention, in Pytorch
Python
564
star
42

nuwa-pytorch

Implementation of NÜWA, state of the art attention network for text to video synthesis, in Pytorch
Python
531
star
43

voicebox-pytorch

Implementation of Voicebox, new SOTA Text-to-speech network from MetaAI, in Pytorch
Python
521
star
44

point-transformer-pytorch

Implementation of the Point Transformer layer, in Pytorch
Python
518
star
45

parti-pytorch

Implementation of Parti, Google's pure attention-based text-to-image neural network, in Pytorch
Python
509
star
46

tab-transformer-pytorch

Implementation of TabTransformer, attention network for tabular data, in Pytorch
Python
485
star
47

alphafold3-pytorch

Implementation of Alphafold 3 in Pytorch
Python
483
star
48

linear-attention-transformer

Transformer based on a variant of attention that is linear complexity in respect to sequence length
Python
468
star
49

magvit2-pytorch

Implementation of MagViT2 Tokenizer in Pytorch
Python
436
star
50

ema-pytorch

A simple way to keep track of an Exponential Moving Average (EMA) version of your pytorch model
Python
408
star
51

egnn-pytorch

Implementation of E(n)-Equivariant Graph Neural Networks, in Pytorch
Python
400
star
52

g-mlp-pytorch

Implementation of gMLP, an all-MLP replacement for Transformers, in Pytorch
Python
391
star
53

recurrent-memory-transformer-pytorch

Implementation of Recurrent Memory Transformer, Neurips 2022 paper, in Pytorch
Python
384
star
54

ring-attention-pytorch

Implementation of πŸ’ Ring Attention, from Liu et al. at Berkeley AI, in Pytorch
Python
380
star
55

siren-pytorch

Pytorch implementation of SIREN - Implicit Neural Representations with Periodic Activation Function
Python
377
star
56

enformer-pytorch

Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch
Python
352
star
57

iTransformer

Unofficial implementation of iTransformer - SOTA Time Series Forecasting using Attention networks, out of Tsinghua / Ant group
Python
349
star
58

robotic-transformer-pytorch

Implementation of RT1 (Robotic Transformer) in Pytorch
Python
346
star
59

memory-efficient-attention-pytorch

Implementation of a memory efficient multi-head attention as proposed in the paper, "Self-attention Does Not Need O(nΒ²) Memory"
Python
342
star
60

FLASH-pytorch

Implementation of the Transformer variant proposed in "Transformer Quality in Linear Time"
Python
334
star
61

bit-diffusion

Implementation of Bit Diffusion, Hinton's group's attempt at discrete denoising diffusion, in Pytorch
Python
313
star
62

slot-attention

Implementation of Slot Attention from GoogleAI
Python
303
star
63

q-transformer

Implementation of Q-Transformer, Scalable Offline Reinforcement Learning via Autoregressive Q-Functions, out of Google Deepmind
Python
293
star
64

BS-RoFormer

Implementation of Band Split Roformer, SOTA Attention network for music source separation out of ByteDance AI Labs
Python
289
star
65

classifier-free-guidance-pytorch

Implementation of Classifier Free Guidance in Pytorch, with emphasis on text conditioning, and flexibility to include multiple text embedding models
Python
282
star
66

transformer-in-transformer

Implementation of Transformer in Transformer, pixel level attention paired with patch level attention for image classification, in Pytorch
Python
277
star
67

axial-attention

Implementation of Axial attention - attending to multi-dimensional data efficiently
Python
273
star
68

conformer

Implementation of the convolutional module from the Conformer paper, for use in Transformers
Python
272
star
69

mixture-of-experts

A Pytorch implementation of Sparsely-Gated Mixture of Experts, for massively increasing the parameter count of language models
Python
264
star
70

deformable-attention

Implementation of Deformable Attention in Pytorch from the paper "Vision Transformer with Deformable Attention"
Python
258
star
71

magic3d-pytorch

Implementation of Magic3D, Text to 3D content synthesis, in Pytorch
Python
258
star
72

x-unet

Implementation of a U-net complete with efficient attention as well as the latest research findings
Python
252
star
73

routing-transformer

Fully featured implementation of Routing Transformer
Python
251
star
74

Adan-pytorch

Implementation of the Adan (ADAptive Nesterov momentum algorithm) Optimizer in Pytorch
Python
245
star
75

spear-tts-pytorch

Implementation of Spear-TTS - multi-speaker text-to-speech attention network, in Pytorch
Python
241
star
76

st-moe-pytorch

Implementation of ST-Moe, the latest incarnation of MoE after years of research at Brain, in Pytorch
Python
237
star
77

perfusion-pytorch

Implementation of Key-Locked Rank One Editing, from Nvidia AI
Python
229
star
78

equiformer-pytorch

Implementation of the Equiformer, SE3/E3 equivariant attention network that reaches new SOTA, and adopted for use by EquiFold for protein folding
Python
227
star
79

segformer-pytorch

Implementation of Segformer, Attention + MLP neural network for segmentation, in Pytorch
Python
227
star
80

sinkhorn-transformer

Sinkhorn Transformer - Practical implementation of Sparse Sinkhorn Attention
Python
222
star
81

pixel-level-contrastive-learning

Implementation of Pixel-level Contrastive Learning, proposed in the paper "Propagate Yourself", in Pytorch
Python
220
star
82

lumiere-pytorch

Implementation of Lumiere, SOTA text-to-video generation from Google Deepmind, in Pytorch
Python
216
star
83

local-attention

An implementation of local windowed attention for language modeling
Python
216
star
84

CoLT5-attention

Implementation of the conditionally routed attention in the CoLT5 architecture, in Pytorch
Python
216
star
85

natural-speech-pytorch

Implementation of the neural network proposed in Natural Speech, a text-to-speech generator that is indistinguishable from human recordings for the first time, from Microsoft Research
Python
215
star
86

soft-moe-pytorch

Implementation of Soft MoE, proposed by Brain's Vision team, in Pytorch
Python
211
star
87

se3-transformer-pytorch

Implementation of SE3-Transformers for Equivariant Self-Attention, in Pytorch. This specific repository is geared towards integration with eventual Alphafold2 replication.
Python
211
star
88

block-recurrent-transformer-pytorch

Implementation of Block Recurrent Transformer - Pytorch
Python
205
star
89

Mega-pytorch

Implementation of Mega, the Single-head Attention with Multi-headed EMA architecture that currently holds SOTA on Long Range Arena
Python
201
star
90

simple-hierarchical-transformer

Experiments around a simple idea for inducing multiple hierarchical predictive model within a GPT
Python
198
star
91

med-seg-diff-pytorch

Implementation of MedSegDiff in Pytorch - SOTA medical segmentation using DDPM and filtering of features in fourier space
Python
195
star
92

triton-transformer

Implementation of a Transformer, but completely in Triton
Python
195
star
93

jax2torch

Use Jax functions in Pytorch
Python
194
star
94

flash-cosine-sim-attention

Implementation of fused cosine similarity attention in the same style as Flash Attention
Cuda
194
star
95

halonet-pytorch

Implementation of the πŸ˜‡ Attention layer from the paper, Scaling Local Self-Attention For Parameter Efficient Visual Backbones
Python
193
star
96

attention

This repository will house a visualization that will attempt to convey instant enlightenment of how Attention works to someone not working in artificial intelligence, with 3Blue1Brown as inspiration
HTML
189
star
97

recurrent-interface-network-pytorch

Implementation of Recurrent Interface Network (RIN), for highly efficient generation of images and video without cascading networks, in Pytorch
Python
188
star
98

electra-pytorch

A simple and working implementation of Electra, the fastest way to pretrain language models from scratch, in Pytorch
Python
186
star
99

PaLM-jax

Implementation of the specific Transformer architecture from PaLM - Scaling Language Modeling with Pathways - in Jax (Equinox framework)
Python
184
star
100

unet-stylegan2

A Pytorch implementation of Stylegan2 with UNet Discriminator
Python
182
star