Discover kstawiski/seq-pipeline Open Source project

Stars
10
Rank 1,807,489 (Top 36 %)
Language
PHP
Created about 2 years ago
Updated about 1 year ago

kstawiski

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Workspace for data science projects and NGS pipelines. Contains RStudio, Jupyter Notebook, VSCode and file manager. Can connect to Tailscale network to bypass firewalls.

OmicSelector

OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throughput omics experiments and other multidimensional datasets. Initially developed for miRNA-seq, RNA-seq and qPCR.

OmicApp

Shiny Complex App framework with OmicSelector for all purposes

JavaScript

miRNAselector

Environment, docker-based application and R package for biomarker signiture selection (feature selection) from high-throughput experiments and other. Initially developed for miRNA-seq (small RNA), RNA-seq and qPCR.

HTML

jobczyk2020-app

A new tool to predict early-stage bladder cancer recurrence and progression. The application uses advanced artificial intelligence to combine state-of-the-art scales, outperforms them, and is freely available online.

Python

hippohelper

HippoHelper: Clinically accessible CT-based only delineation of hippocampus using machine learning – a pilot study.

kstawiski/seq-pipeline

kstawiski

Reviews

Repository Details

More Repositories