kstawiski/hippohelper

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Created about 1 year ago
Updated about 1 year ago

kstawiski/hippohelper

kstawiski

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HippoHelper: Clinically accessible CT-based only delineation of hippocampus using machine learning – a pilot study.

OmicSelector

OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throughput omics experiments and other multidimensional datasets. Initially developed for miRNA-seq, RNA-seq and qPCR.

seq-pipeline

Workspace for data science projects and NGS pipelines. Contains RStudio, Jupyter Notebook, VSCode and file manager. Can connect to Tailscale network to bypass firewalls.

OmicApp

Shiny Complex App framework with OmicSelector for all purposes

miRNAselector

Environment, docker-based application and R package for biomarker signiture selection (feature selection) from high-throughput experiments and other. Initially developed for miRNA-seq (small RNA), RNA-seq and qPCR.

jobczyk2020-app

A new tool to predict early-stage bladder cancer recurrence and progression. The application uses advanced artificial intelligence to combine state-of-the-art scales, outperforms them, and is freely available online.