klmr/te klmr/te

  • Stars
    star
    2
  • Language Makefile
  • Created almost 8 years ago
  • Updated almost 8 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
klmr/te
github

klmr

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Map, quantify and analyse transposable element expression

More Repositories

1

box

Write reusable, composable and modular R code
R
737
star
2

named-operator

Named operators for C++
C++
487
star
3

cpp11-range

Range-based for loops to iterate over a range of numbers or values
C++
304
star
4

thesis

My PhD thesis, “Investigating the link between tRNA and mRNA abundance in mammals”
TeX
38
star
5

lisp.cpp

Minimal Lisp implementation in C++, inspired by “lispy”
C++
37
star
6

decorator

R function decorators
R
33
star
7

multifunction

A multicast function type for C++
C++
27
star
8

minimappr

Code minimaps for R
R
19
star
9

hyperlight

Automatically exported from code.google.com/p/hyperlight
PHP
16
star
10

fun

Module for functional programming in R
R
16
star
11

sys

Easily create reusable command line scripts with R
R
13
star
12

example-r-analysis

An example for an R analysis workflow using a Makefile, shell scripts and Knitr
R
12
star
13

trna

tRNA gene regulation downstream analysis
R
8
star
14

cv

Resume
TeX
6
star
15

unpack

Vector unpack assignment syntax for R
R
5
star
16

math-art

R
4
star
17

streampunk

Compiler for a pipe-based stream language to construct complex pipelines
C++
4
star
18

knitr-example

An example of a genomics analysis using knitr
4
star
19

rcane

Miscellaneous R tools that I haven’t had time yet to properly integrate. (deprecated and unmaintained)
R
3
star
20

modules

An alternative module system for R
R
3
star
21

parser-combinators

Parser combinators in R
R
2
star
22

system-setup

Bootstrap a usable system configuration for OS X
Shell
2
star
23

vim-snakemake

Snakemake Vim definitions, copied from https://bitbucket.org/snakemake/snakemake/
Vim Script
2
star
24

.files

My dotfiles repository
Shell
2
star
25

klmr.github.io

My website
JavaScript
2
star
26

switch-r

R version switcher for macOS
Shell
2
star
27

cpp11-raw-ptr

A raw pointer type for C++11
C++
2
star
28

ggplots

Some (different, better) defaults for ggplot2
R
2
star
29

trna-chip-pipeline

Upstream ChIP-seq analysis pipeline for tRNA data
Python
2
star
30

rnaseq-norm

Presentation slides about RNA-seq normalisation methods
Makefile
1
star
31

pichip

Makefile
1
star
32

codons

Analysis of adaptation of translation efficiency by means of codon–anticodon selection
R
1
star
33

bog-2015-poster

Biology of Genomes 2015 poster
PostScript
1
star
34

aka

R
1
star
35

roxydoxy

R
1
star
36

r-dict

R
1
star
37

poly-u

R
1
star
38

royal-jelly

R
1
star