kauralasoo/flow_cytomtery_genetics

Stars
1
Language
R
License
Apache License 2.0
Created over 6 years ago
Updated over 2 years ago

kauralasoo/flow_cytomtery_genetics

kauralasoo

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Analysis of macrophage cell surface expression of CD14, CD16 and CD206 proteins using flow cytometry.

wiggleplotr

A small R package to make sequencing read coverage plots in R.

MTAT.03.239_Bioinformatics

Teaching materials and tutorials for the bioinformatics course thought at the University of Tartu

seqUtils

Semi-random collection of R functions to work with sequencing data.

macrophage-gxe-study

Shared genetic effects on chromatin and gene expression reveal widespread enhancer priming in immune response

eQTLUtils

Collection of reusable R functions for eQTL mapping

txrevise

Construct custom transcript annotations for Salmon

utils

Small scripts and wrapper around tools to deal with genomics data.

RNAseq_pipeline

Pipeline for downloading and processing published RNA-seq datasets

WordOCR

Toy example of optical character recognition implemented with OpenCV

WigglePlotR_old

A tool to create wiggle plots from RNA-Seq in R.

Blood_ATAC

Reanalysis of the ATAC-Seq data from the Corces et al. 2016 paper

ryanair-seat-allocation

How random are Ryanair's randomly allocated seats really?

pivotviewer.py

Tools to create PivotViewer collections in Python.

macrophage-tuQTLs

reviseAnnotations

R package to compare transcript annotations and split them into alternative transcription events.

colocWrapper

Helpful functions to streamline colocalisation analysis with coloc