kathoffman/cedar

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Created about 5 years ago
Updated about 4 years ago

kathoffman/cedar

kathoffman

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R functions to wrangle the Weill Cornell Medicine CEDAR ICU database.

causal-inference-visual-guides

A collection of visual guides to help applied scientists learn causal inference.

steroids-trial-emulation

Tutorial for a target trial emulation with a time-varying exposure, time-dependent confounding, time-to-event outcome, and Sequentially Doubly Robust estimation (Hoffman et al. 2022).

lmtp-tutorial

Corresponding code guide to the tutorial paper "Introducing longitudinal modified treatment policies: a unified framework for studying complex exposures" (Hoffman et al., 2023)

swimmer-plots

Slides for my R/Medicine 2022 talk, "Making Swimmer Plots for Longitudinal Data using {ggplot}".

khstats-quarto

Trials and tribulations of redoing KHstats website in Quarto.

lida-comprisks

Code and synthetic data for the illustrative application of "Causal survival analysis under competing risks using longitudinal modified treatment policies" (Diaz, Hoffman, Hejazi 2022).

Rproj-here-tutorial

Slides and interactive code for NYC R-Ladies June 2019 Lightning Talk and WCM Computing Club presentation.

sl3-demo

A demo of the R package sl3 for R-Ladies NYC Sept. 2019 Meetup

tmleplus

R functions to calculate effects from tmle, ltmle, survtmle, and SuperLearner fit objects.

superlearning-wcm-cc

Presentation materials for WCM Computing Club talk.

sixpack

core[lation] work

sot-sepsis-application

Code and synthetic data to run the analyses for "Effect of Sepsis on Death as Modified by Solid Organ Transplantation" (Ackerman et al., 2022). Exposure is sepsis upon ICU admission, effect modifier is solid organ transplant (SOT) status, outcome is time to 28-day mortality. Informative loss-to-follow-up by discharge from the hospital.

snack

R functions for robust SE reporting

power_sims

The beginnings of a tutorial for building custom power simulations in R. Includes code for SLR power sim and presentation for WCM Biostatistics Computing Club.

causal-club

Estimation code practice for WCM's Causal (Inference) Club 💛📙❤️

uw-quarto-proj

Template for University of Washington classwork/projects.

lmtp_comprisks

modifying nt-williams/lmtp for comp risks