kaizhang/bio-pipelines

This repository has been archived on 04/May/2020
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Haskell
License
BSD 3-Clause "New...
Created about 8 years ago
Updated over 7 years ago

kaizhang/bio-pipelines

kaizhang

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Deprecated

SnapATAC2

Single-cell epigenomics analysis tools

SciFlow

Scientific workflow management

anndata-rs

clustering

fast clustering algorithms

bioinformatics-toolkit

A collection of bioinformatics algorithms

haskell-plot

2D plotting library in pure haskell

Taiji

This project has been moved to:

haskell-igraph

Haskell bindings to igraph library.

single-cell-benchmark

HsHTSLib

matrices

Haskell matrix library

LDSC

dataset

An archive of datasets distributed with R, copied from https://github.com/vincentarelbundock/Rdatasets

jsvim

javascript based Vim

statistics-correlation

Correlations in Pure Haskell: Pearson's r, Spearman's rho, Kendall's tau

HMM

Hidden Markov Model

drmaa

A very simple Haskell bindings to drmaa library.

hpc-cluster

Automate the process of building HPC clusters.

glasso

Graphical Lasso algorithm adapted from R package "huge"

citeproc-endnote

Pandoc filter which converts LaTeX to Docx with EndNote traveling library.

DBPnet

Inferring cooperation of DNA binding proteins in 3D genome.

hungarian-munkres

Haskell binding to C libhungarian

bio-experiments