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nanopolish
Signal-level algorithms for MinION datasga
de novo sequence assembler using string graphsncov-tools
Small collection of tools for performing quality control on coronavirus sequencing data and genomesnanocorrect
Experimental pipeline for correcting nanopore readsassembly_accuracy
tools for assessing the accuracy of genome assembliesnanopore-paper-analysis
Code for nanopore paperdbgfm
FM-index representation of a de Bruijn graphbam2fastq
Simple convertor from bam to FASTQbri
Bam Read Index - Extract alignments from a bam file by readnamesmrest
Tumour-only somatic mutation calling using long readsnanopore-rna-analysis
mbtools
ncov-watch
Tools for detecting mutations of interest in SARS-CoV-2 sequencing resultscsc2417
Course webpage for CSC2417gfademo
Small demonstration of the GFA formatsga-extra
Extra tools and utilities for sgabwt-benchmark
Framework to benchmark BWT construction algorithmsnanopore_cfdna
ncov-random-scripts
tpdb
misc
Miscellaenous source codemodbam_example
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