jokergoo/gsubeval jokergoo/gsubeval

  • Stars
    star
    1
  • Language
    R
  • License
    Other
  • Created over 4 years ago
  • Updated over 4 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
jokergoo/gsubeval
github

jokergoo

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Substitute with an Evaluated Expression

More Repositories

1

ComplexHeatmap

Make Complex Heatmaps
R
1,204
star
2

circlize

Circular visualization in R
R
928
star
3

EnrichedHeatmap

make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
R
180
star
4

spiralize

Visualize data on spirals
R
135
star
5

InteractiveComplexHeatmap

Make Interactive Complex Heatmaps
R
116
star
6

simplifyEnrichment

Simplify functional enrichment results
R
94
star
7

rGREAT

GREAT Analysis - Functional Enrichment on Genomic Regions
R
74
star
8

cola

A General Framework for Consensus Partitioning
HTML
57
star
9

pkgndep

Analyzing Dependency Heaviness of R Packages
R
44
star
10

HilbertCurve

Visualize genomic data by Hilbert curve
R
40
star
11

gtrellis

Genomic plot in trellis layout
R
39
star
12

circlize_book

Documentation for circlize package
HTML
36
star
13

KeywordsEnrichment

R
30
star
14

bsub

Send R code/R scripts/shell commands to LSF cluster without leaving R
R
22
star
15

ComplexHeatmap-reference

Documentation of ComplexHeatmap package
HTML
21
star
16

GetoptLong

Parse command-line arguments and simple variable interpolation
R
16
star
17

ComplexHeatmap_v2_paper_code

R
15
star
18

GSEAtraining

HTML
14
star
19

circlize_examples

circlize examples
HTML
12
star
20

BioMartGOGeneSets

Gene Ontology Gene Sets from BioMart
R
10
star
21

ComplexHeatmap-examples

R
10
star
22

BioCartaImage

BioCarta pathway images
R
9
star
23

jokergoo

9
star
24

ngspipeline

NGS pipeline
Perl
9
star
25

IlluminaHumanMethylationEPICv2anno.20a1.hg38

R
8
star
26

Crypt-DNASequence

Encrypt and decrypt strings to DNA Sequences
Perl
8
star
27

Useful_R_packages

8
star
28

GlobalOptions

Generate function to get or set global options
R
8
star
29

simona

Semantic Similarity in Bio-Ontologies
R
7
star
30

IlluminaHumanMethylationEPICv2manifest

R
6
star
31

cola_hcp

Hierarchical Consensus Partitioning
5
star
32

jokergoo.github.io

Personal website
HTML
4
star
33

spiralize_vignettes

Vignettes of the spiralize package
HTML
4
star
34

pheatmap2

pretty and parallel heatmap
R
4
star
35

GeneSummary

RefSeq gene summary
R
2
star
36

BioMartGOGeneSets_data

2
star
37

cotools

NGS tools for Conputational Oncology group in DKFZ
R
2
star
38

cola_manuscript

Scripts for the cola manuscript
R
2
star
39

UniProtKeywords

Keywords from the UniProt database
R
2
star
40

supplementary

HTML
2
star
41

simplifyEnrichment_supplementary

Supplementary for simplifyEnrichment manuscript
HTML
2
star
42

cola_examples

Examples of cola analysis
HTML
2
star
43

CePa

Centrality-based pathway enrichment
R
2
star
44

colorRamp2

Generate Color Mapping Functions
R
1
star
45

cola_vignettes

Vignettes of the cola package
HTML
1
star
46

GTF

Simple class to process GTF data
R
1
star
47

top2pct_scientists

top2pct_scientists
R
1
star
48

epik

Integrative analysis for epigenomic sequencing data
HTML
1
star
49

simona_supplementary

HTML
1
star
50

List-Vectorize

vectorized functions in perl
Perl
1
star
51

Statistics-Multtest

Control false discovery rate in multiple test
Perl
1
star
52

Microarray-GEO-SOFT

Reading microarray data in SOFT format from GEO database
Perl
1
star