jmonlong/poly-wdl jmonlong/poly-wdl

  • Stars
    star
    1
  • Language
    Emacs Lisp
  • License
    GNU General Publi...
  • Created over 5 years ago
  • Updated about 5 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
jmonlong/poly-wdl
github

jmonlong

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Polymode for the Worflow Description Language in Emacs

More Repositories

1

Hippocamplus

A place to gather useful information I keep on forgetting.
HTML
30
star
2

PopSV

Population-based detection of structural variation from High-Throughput Sequencing.
R
28
star
3

sveval

Functions to compare a SV call sets against a truth set.
R
24
star
4

sQTLseekeR

R package to detect splicing QTLs (sQTLs)
R
14
star
5

pangenome-evaluation

Pipeline to evaluate pangenomes, e.g. from the variation it contains or how well reads map
Python
10
star
6

manu-vgsv

HTML
9
star
7

scCNAutils

Functions to analyze copy number aberrations in single-cell data
R
8
star
8

sv-nicu

Annotation pipeline for structural variants found in long reads (e.g. ONT) in NICU patients.
R
6
star
9

jmonlong.github.io

Personal page
TeX
4
star
10

reppopsv

R
2
star
11

KyotoWorkshop16-LinuxIntro

HTML
1
star
12

docker-wambam

Docker for wambam (https://github.com/rlorigro/wambam)
Dockerfile
1
star
13

terra-utils

Docker images and notebook I use(d) on Terra (https://app.terra.bio/)
Jupyter Notebook
1
star
14

MonBUG17_Gviz

Short workshop on how to use Gviz package.
HTML
1
star
15

workshop-hprc-hugo24

HTML
1
star
16

variant_annotation_wf

Workflow to annotate SNVs, indels, and structural variants
WDL
1
star
17

docker-smoothxg

Container for smoothxg
Dockerfile
1
star
18

docker-graphaligner

Docker container for GraphAligner
Dockerfile
1
star
19

docker-pgge

Docker container to run pgge (https://github.com/pangenome/pgge)
Dockerfile
1
star