jebyrnes/Ecological-SEMs-in-lavaan

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Created over 13 years ago
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jebyrnes/Ecological-SEMs-in-lavaan

jebyrnes

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Recreating SEM analyses from papers using the R lavaan package

semclass

Github repo for SEM for Ecology and Evolutionary Biology course

multifunc

A package for the analysis of how drivers affect multiple functions in a system.

spatial_correction_lavaan

A method to alter standard errors from spatial autocorrelation using lavaan and ape

phrag_common_garden_sem

Code repo for Plant lineage determines rhizosphere microbial structure and activity in a cosmopolitan species

hadsstR

R Library for working with HadSST Data

ne_marsh_food_web

Data on feeding interactions in New England Salt Marshes from M. J. Hensel

biol697

R and knitr files for Biol697

r_deep_learning_vision_systems

This is an attempt to translate Deep Learning for Vision Systems into R code using the keras and tensorflow library.

divChangeHMM

Development of hierarchical methods for examining change in species diversity

sinterval

Generate simulated values from models with different intervals of uncertainty

ovb_yeah_you_know_me

To keep track of the developing omitted variable bias MS

new_multifunc_metric

quantRegLines

A function to plot quantile regression lines

seagrass-multifunc

Multifunc talk from WSN 2013

borror_2022_survey_map

ipbes_marine_americas

Code for making figures for IPBES report on marine diversity in the Americas

keen_gom_temp

Repo for GOM Temperature-Kelp forest paper

meowR

Data and methods to utilize Spalding et al.'s marine ecoregions of the world

grant_applications

All grants I've ever submitted

velResponse

A re-analysis of the data from Vellend et al 2013. PNAS http://dx.doi.org/10.1073/pnas.1312779110

causal_kelp

pieDivPlots

A function for plotting pie charts instead of points to simultaneously show diversity and composition effects in diversity-ecosystem function experiments.

causal_mods

Exploration of causal model structures for http://rpubs.com/jebyrnes/causal_mods

ff-import-pipeline

Import pipeline step by step for floating forests

r-spatial_dc_workshop_2019-01-22

Code from Jan 22-23 2019 Geospatial Data Carpentry workshop at UMB https://jebyrnes.github.io/2019-01-22-UMB/