jbkinney/mavenn jbkinney/mavenn

  • Stars
    star
    24
  • Rank 986,245 (Top 20 %)
  • Language
    Jupyter Notebook
  • License
    MIT License
  • Created almost 9 years ago
  • Updated 6 months ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
jbkinney/mavenn
github

jbkinney

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect

More Repositories

1

logomaker

Software for the visualization of sequence-function relationships
Jupyter Notebook
181
star
2

suftware

SUFTware: Statistics Using Field Theory
Jupyter Notebook
9
star
3

18_urp

Excercises for the 2018 URP programming workshop
Jupyter Notebook
5
star
4

14_crispr

Code and processed data reported in Shi et al. (2015) Nat. Biotechnol. [in press]
Python
5
star
5

16_titeseq

Processed data and analysis code for Adams et al., 2016 bioRxiv
Python
4
star
6

14_maxent

Code for "Unification of Field Theory and Maximum Entropy Methods for Learning Probability Densities" (2014) by Justin B. Kinney, available at http://arxiv.org/abs/1411.5371
Python
3
star
7

15_splicing

Jupyter Notebook
2
star
8

13_deft

Code for "Rapid and Rapid and deterministic estimation of probability densities using scale-free field theories" arXiv:1312.6661 [physics.data-an]
Python
2
star
9

24e_urp

Code for the 2024 CSHL URP Python Programming Course
Jupyter Notebook
2
star
10

22e_qbbootcamp

Materials for the 2022 QB Bootcamp at Cold Spring Harbor Laboratory
Jupyter Notebook
2
star
11

19_mlcb

Code for Tareen & Kinney (MLCB 2019) https://doi.org/10.1101/835942
Jupyter Notebook
1
star
12

15_sordella

Python
1
star
13

17_qbbootcamp

Exercises for the 2017 WSBS QB Bootcamp
Jupyter Notebook
1
star
14

23e_qbbootcamp

2023 Quantitative Biology Bootcamp at Cold Spring Harbor Laboratory
Jupyter Notebook
1
star