Discover jbkinney/14_maxent Open Source project

Stars
3
Rank 3,963,521 (Top 79 %)
Language
Python
Created about 10 years ago
Updated over 9 years ago

jbkinney

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Code for "Unification of Field Theory and Maximum Entropy Methods for Learning Probability Densities" (2014) by Justin B. Kinney, available at http://arxiv.org/abs/1411.5371

logomaker

Software for the visualization of sequence-function relationships

Jupyter Notebook

181

mavenn

MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect

Jupyter Notebook

suftware

SUFTware: Statistics Using Field Theory

Jupyter Notebook

18_urp

Excercises for the 2018 URP programming workshop

Jupyter Notebook

14_crispr

Code and processed data reported in Shi et al. (2015) Nat. Biotechnol. [in press]

Python

16_titeseq

Processed data and analysis code for Adams et al., 2016 bioRxiv

Python

15_splicing

Jupyter Notebook

13_deft

Code for "Rapid and Rapid and deterministic estimation of probability densities using scale-free field theories" arXiv:1312.6661 [physics.data-an]

Python

24e_urp

Code for the 2024 CSHL URP Python Programming Course

Jupyter Notebook

22e_qbbootcamp

Materials for the 2022 QB Bootcamp at Cold Spring Harbor Laboratory

Jupyter Notebook

19_mlcb

Code for Tareen & Kinney (MLCB 2019) https://doi.org/10.1101/835942

Jupyter Notebook

15_sordella

Python

17_qbbootcamp

Exercises for the 2017 WSBS QB Bootcamp

Jupyter Notebook

23e_qbbootcamp

2023 Quantitative Biology Bootcamp at Cold Spring Harbor Laboratory

Jupyter Notebook

jbkinney/14_maxent

jbkinney

Reviews

Repository Details

More Repositories