jbkinney/13_deft

Stars
2
Language
Python
License
MIT License
Created over 10 years ago
Updated almost 3 years ago

jbkinney/13_deft

jbkinney

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Code for "Rapid and Rapid and deterministic estimation of probability densities using scale-free field theories" arXiv:1312.6661 [physics.data-an]

logomaker

Software for the visualization of sequence-function relationships

Jupyter Notebook

mavenn

MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect

Jupyter Notebook

suftware

SUFTware: Statistics Using Field Theory

Jupyter Notebook

18_urp

Excercises for the 2018 URP programming workshop

Jupyter Notebook

14_crispr

Code and processed data reported in Shi et al. (2015) Nat. Biotechnol. [in press]

16_titeseq

Processed data and analysis code for Adams et al., 2016 bioRxiv

14_maxent

Code for "Unification of Field Theory and Maximum Entropy Methods for Learning Probability Densities" (2014) by Justin B. Kinney, available at http://arxiv.org/abs/1411.5371

15_splicing

Jupyter Notebook

24e_urp

Code for the 2024 CSHL URP Python Programming Course

Jupyter Notebook

22e_qbbootcamp

Materials for the 2022 QB Bootcamp at Cold Spring Harbor Laboratory

Jupyter Notebook

19_mlcb

Code for Tareen & Kinney (MLCB 2019) https://doi.org/10.1101/835942

Jupyter Notebook

15_sordella

17_qbbootcamp

Exercises for the 2017 WSBS QB Bootcamp

Jupyter Notebook

23e_qbbootcamp

2023 Quantitative Biology Bootcamp at Cold Spring Harbor Laboratory

Jupyter Notebook