jaswindersingh2/RNAcmap

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Language
Python
Created over 4 years ago
Updated over 2 years ago

jaswindersingh2/RNAcmap

jaswindersingh2

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A Fully Automatic Method for Predicting Contact Maps of RNAs by Evolutionary Coupling Analysis

SPOT-RNA

RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.

SPOT-RNA2

Improved RNA Secondary Secondary Structure Prediction using Evolutionary Profile, Mutational Coupling and Two-dimensional Transfer Learning

RNAsnap2

Single-sequence and Profile-based Prediction of RNA Solvent Accessibility Using Dilated Convolution Neural Network

SPOT-RNA-2D

SPOT-RNA-2D: Predicting RNA distance-based contact maps by integrated deep learning on physics-inferred base-pairing and evolutionary-derived coupling

SPOT-RNA-1D

RNA Backbone Torsion and Pseudotorsion Angle Prediction using Dilated Convolutional Neural Networks

RNAcmap2

Improved RNA homology detection and alignment by automatic iterative search in an expanded database

spotrna

A docker image of SPOT-RNA