• Stars
    star
    1
  • Language
  • Created about 3 years ago
  • Updated almost 2 years ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Data submission template for the Pacific islands Marine bioinvasions Alert Network (PacMAN) project

More Repositories

1

robis

R client for the OBIS API
R
29
star
2

obistools

Tools for data enhancement and quality control
R
18
star
3

pyobis

OBIS Python client
Jupyter Notebook
15
star
4

Project-team-Genetic-Data

Developing guidelines for adding sequence data to OBIS
10
star
5

obis-network-datasets

Workflow for processing OBIS tagged datasets in GBIF
Python
9
star
6

PacMAN-pipeline

Bioinformatics pipeline for the analysis of amplicon sequencing data of eDNA samples from the PacMAN project
R
9
star
7

obis-qc

OBIS QC checks
Python
9
star
8

dataset-edna

eDNA dataset demonstrator
Jupyter Notebook
8
star
9

pyworms

Python client for the WoRMS REST service
Python
6
star
10

obis-issues

Repository for all OBIS related issues and feature requests
5
star
11

manual

The OBIS manual
HTML
5
star
12

dataqueue

On deck datasets on their way into an OBIS node
4
star
13

vocab

3
star
14

non-matching-names

Workflow to build non matching names list
Python
2
star
15

env-data

ENV-DATA related issues and documentation
2
star
16

ebsa

R code to calculate biodiversity indices and other metrics in support of the CBD EBSA process
R
2
star
17

worms

R package for consuming the WoRMS webservice
R
2
star
18

gbif-marine

Python
2
star
19

protectedseas-statistics

R
2
star
20

mgnify-extract

Jupyter Notebook
1
star
21

smalldata

JavaScript
1
star
22

papers

OBIS papers from Google Scholar
1
star
23

dwca-generator

Generation of Darwin Core Archives from OBIS data
Python
1
star
24

geobon-webinar

Code for the GEO BON Open Science Conference 2020 talk
R
1
star
25

woa2-fish

WOA2 fish biodiversity
R
1
star
26

ebsa_np

EBSA statistics using R
R
1
star
27

dataproducts

Dataproducts using OBIS data
R
1
star
28

quality-taskteam

OBIS data quality task team
1
star
29

edna-tracker-data

GitHub action for transforming eDNA samples metadata from PlutoF
Python
1
star
30

iwg-products

Repository for the Intersessional Working Group on data products.
1
star
31

pacman-pipeline-training

Training materials for the PacMAN bioinformatics pipeline
HTML
1
star
32

mapper

Mapper prototype
JavaScript
1
star
33

otga-course-review

Issues related to OBIS courses on OTGA
1
star
34

sdmcourse

Training material for the SDM course
HTML
1
star
35

mof-viewer

JavaScript
1
star
36

tracking-data

Repository for the OBIS Event Data Workshop on animal tagging and tracking data
HTML
1
star
37

mwhs-data-mobilization

Biodiversity data mobilization for marine World Heritage sites.
HTML
1
star
38

dwca-processor

Parses and denormalizes Darwin Core Archives
Python
1
star
39

demo-polar

Demo of intersecting OBIS records and arctic or antarctic geometries.
R
1
star
40

paper-hab-trends

1
star
41

sg-12-training

HTML
1
star