inbo/fistools

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Created 5 months ago
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inbo/fistools

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Repo containing widely used data & functions of the FIS team

tutorials

A collection of technical tutorials for INBO (and anyone who's interested)

checklist

An R package for checking R packages and R code

bird-tracking

🛰🐦 Bird tracking - GPS tracking network for large birds

crow

Online tool to visualize birds detected by weather radars

data-publication

🔓 Open biodiversity data publication by the INBO

INBOmd

An R package with a collection of RMarkdown styles and templates. Elaborate examples are available at https://github.com/inbo/INBOmd_examples

pywhip

Python package to validate data against whip specifications

inborutils

🍁 Collection of useful R utilities and snippets

camtraptor

Camtraptor is an R package to read, explore and visualize Camera Trap Data Packages (Camtrap DP)

whip

✅ Human and machine-readable syntax to express specifications for data

etn

R package to access data from the European Tracking Network

effectclass

Interpret effects and visualise uncertainty

protocolhelper

Helper functions and templates to manage the INBO/protocols repository.

camtrapdp

R package to read and manipulate Camera Trap Data Packages (Camtrap DP)

coding-club

INBO coding club: share digital skills in a welcoming environment

niche_vlaanderen

Python package to run the NICHE Vlaanderen model

etn-occurrences

Acoustic telemetry data 🔊🐟

INLA

WARNING! This is a read-only mirror of the INLA package. It is updated each time a new R version is released. For the latest version please visit www.r-inla.org.

inbospatial

🍁 Collection of useful R functions for spatial data

ipt-dcat

📃 Data Catalog Vocabulary (DCAT) functionality for the IPT

inlatools

An R package with useful functions to diagnose INLA models

INBOtheme

An R package with several ggplot2 themes

fish-tracking

🐟 Collection of scripts for processing and analysing fish tracking data

movepub

R package to prepare animal tracking data from Movebank for publication in a research repository or GBIF

git-course

Course material for Git(Hub) course at INBO

collective-access

CollectiveAccess is free, open-source software for cataloguing and publishing museum and archival collections. We are currently evaluating and configuring the application for the INBO collections, in the context of the DiSSCo Flanders project (https://dissco-flanders.be/).

mas-piloot

Monitoring biodiversiteit in het agrarisch gebied

oscibio

OSCIBIO website

mica-dashboard

🐀 A web-based dashboard for the MICA project

moneos

n2khab

R package with preprocessing functions and standard reference data for Flemish Natura 2000 (N2K) habitat (HAB) analyses

reporting-rshiny-waterbirds

Rshiny app for waterbirds reports

mica-occurrences

Darwin Core mapping for the aggregated Muskrat dataset

n2kanalysis

watina

R package for querying & processing data from the INBO Watina database (groundwater data)

n2khab-pa

Data processing underpinning INBO's 2019 report on an assessment framework for launching programmatic approaches (PA) in the Flemish Natura 2000 Programme

inboqmd_examples

prj_edna_refdb

Scripts for creating and updating e-dna reference databases

mbag-reports

dwc-event-workshop

Use cases for the workshop on managing sampling Event data in GBIF

n2khab-monitoring

Task + repository planning & workflow documentation in Flemish Natura 2000 habitat monitoring

reporting-rshiny-woonuitbreidingsgebieden

Rshiny app for the visualisation of the WUG

gulltracking

🦅 R package to annotate GPS tracking data of gulls

ibge-bim-species

Validation of species list of Brussels Environment

multimput

multimput is an R package that assists with analysing dataset with missing values using multiple imputation.

n2khab-preprocessing

Broadly useful data preparation for Flemish Natura 2000 habitat analyses

wwf-lpi

Work done by INBO for WWF Belgium to prepare biodiversity data for the calculation of a Belgian Living Planet Index

grtsdb

Spatially balanced sampling based on the General Randomized Tessellation Stratified (GRTS) using R and SQLite

reporting-rshiny-grofwildjacht

Rshiny app for grofwildjacht

lifewatch-meeting-2018

Tutorials, code and materials for the 2018 LifeWatch user meeting

procesbeheer-begrazing

Langetermijn-monitoring van de processen in kerngebieden die representatief zijn voor onbeheerde climaxvegetaties of door begrazing gestuurde mozaïeklandschappen

LSVI

Rekenmodule Lokale Staat Van Instandhouding van habitattypen

craywatch

Craywatch project website

fscc

Forest Soil Coordinating Centre (FSCC) of ICP Forests

bayesian-workshop-2023

wmh-analysis

Analysis of migration patterns of western marsh harriers using GPS tracking data for Vansteelant et al. (2020)

vlaams-biodiversiteitsportaal