imcf/python-micrometa

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Created about 6 years ago
Updated 9 months ago

imcf/python-micrometa

imcf

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☕ 🐍 🔬 Package for processing metadata from various light-microscopy related data formats.

auto-tx

Official GitHub mirror of the AutoTx intelligent background transfer service.

lxc-scripts

🚚 🚧 Scripts and stuff to automatically create LXC containers in various flavours.

read_roi

Easy read ImageJ / Fiji ROI binaries in Python

pyppms

📑 🕙 🐍 A Python package to communicate with Stratocore's PUMAPI.

rlm-prometheus

Prometheus exporter providing metrics from a Reprise License Manager (RLM) instance.

hrm-omero

The HRM-OMERO connector

zenodo-doi-for-existing-release

Update Zenodo to recognize existing GitHub releases

jython-olefile

☕ 🐍 🔬 A mavenized package of Philippe Lagadec's "olefile" Python module to be used in ImageJ2.

snijder

✂️ Single Node Inhomogeneous Job Dispatcher, Executor & Reporter

noisee

🔬 NoiSee: An easy-to-use ImageJ macro for measuring SNR (signal-to-noise ratio) of light microscopes.

omero-cli-helper

Scripts to facilitate command line operations with an OMERO server.

nvsmi-prometheus-textfile

A zero-dependencies metrics collector for Prometheus based on "nvidia-smi" written in Python.

imcf-fiji-scripts

🔧 📝 ☕ 🔬 Scripts for Fiji provided by the Imaging Core Facility, Biozentrum, University of Basel

hrm_containerization

🔮🔬 Installation scripts for setting up the HRM in containers. 🚚 🚧 🐳