ihmeuw/Resource_Tracking_US_DEX

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ihmeuw/Resource_Tracking_US_DEX

ihmeuw

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This repository contains cleaned code that the Resource Tracking US Health Spending, also known as US disease expenditure (DEX), sub-team used to generate results for their publications.

ihme-modeling

GATHER compliant code for the GBD

ScrollyTeller

A JavaScript library to build scrollytelling visualizations from tabular data

dismod_mr

An Integrative Metaregression Framework for Descriptive Epidemiology

vivarium

A python microsimulation framework

lbd

Local Burden of Disease

cartodb-docker

CartoDB containerized as separate microservices with Docker

ihme-python-course

IHME's Python data science curriculum for new employees

Jupyter Notebook

covid-model-seiir-pipeline

The IHME COVID-19 SEIIR Model.

ihme-ui

Institute for Health Metrics and Evaluation UI Toolkit

vivarium_public_health

Vivarium microsimulation tools used to model diseases and interventions.

glsl-rgba-to-float

WebGL shader function to decode a 32-bit float from the RGBA color channels of a texel

pseudopeople

pseudopeople is a Python package that generates realistic simulated data about a fictional United States population, designed for use in testing entity resolution (record linkage) methods or other data science algorithms at scale.

covid-model-deaths

The IHME Covid-19 Statistical deaths model

Jupyter Notebook

leaflet.tilelayer.glcolorscale

Custom Leaflet TileLayer using WebGL to colorize pixels according to a specified color scale

covid-model-seiir

IHME Covid-19 SEIIR Model

data-science-brown-bag

IHME's weekly Data Science Brown Bag series

covid-model-deaths-spline

Spline model of past deaths with a limited forecast based on case load.

gbd_mapping

Mapping of GBD entities to their metadata

SmartVA-Analyze

SmartVA-Analyze Desktop Application

CHAIN_IHME_adultmortality_edu_sysreview

wkb-raster

JavaScript parser for the Well-Known Binary (WKB) RASTER type used in PostGIS

vivarium_research

Documentation for working on vivarium research projects.

covid-shared

Shared paths and command-line utilities for the IHME Covid-19 pipeline.

cascade-at

Multi-stage hierarchical estimation of disease processes on demographic observations

fhs_2019_population_paper

GATHER compliant code for FHS 2019 population forecast

covid-crosscountry-analysis

Resource_Tracking_Domestic_Health_Accounts

This repository contains cleaned code that the Resource Tracking Domestic Health Accounts (DHA) sub-team used to generate results for their publications.

person_linkage_case_study

Emulates the methods the US Census Bureau uses to link people across multiple data sources, using open-source software (Splink) and simulated data (from pseudopeople).

pcv-impact

An ensemble model for estimating health impact from time series data

ihme.covid

mental_disorders

Public code from the Mental Disorders team on the Global Burden of Disease project

gf

Central repository for Global Fund PCE code

amr

vivarium_cluster_tools

Tools for running Vivarium simulations on IHME's Slurm cluster

vivarium_census_prl_synth_pop

US Census Probabilistic Record Linkage synthetic population generation

covid-model-infections

IHME COVID-19 past infections model

lbd_2017

USHD

easylink

CODEm-2010

Cause of Death Ensemble Model

Resource_Tracking_Economic_Indicators

This repository contains cleaned code that the Resource Tracking Economic Indicators sub-team used to generate results for their publications.

covid-historical-model

IHME empirical model of past COVID-19 infections, confirmed cases, hospitalizations, and deaths.

Resource_Tracking_DAH

This repository contains cleaned code that the Resource Tracking Development Assistance for Health (DAH) sub-team used to generate results for their publications.

covid-seiir-covariates

Data dump of covariates used in the IHME covid-19 model.

CVDdisparities

past_covid_infection_meta_analysis

gridengineapp

An application framework for running under Grid Engine

vivarium_nih_us_cvd

vivarium_research_lsff

For all code and corresponding inputs maintained by the research side of the sim science team for the LSFF project.

Jupyter Notebook

vivarium_research_prl

Simulation Science research team repo for probabilistic record linkage project

vivarium_uw_covid

Jupyter Notebook

vivarium_inputs

vivarium_csu_ltbi

gbd_coverage

GEM

team

anemia_gbd2021

sharing code for the GBD 2021 anemia paper which will be published in the Lancet Haematology INFR-15310

vivarium_nih_us_cvd_OLD

vivarium_conic_sqlns

Jupyter Notebook

vivarium-academyhealth-fdc

Health impact of hypertension control in four countries: an individual-based simulation model calibrated to Global Burden of Disease Study estimates

environmental_risk_factors

steamfitter

Tool for creating and managing high-throughput data and modeling pipelines.

rra-doc-template

Documentation Template for Rapid Response and Analytics projects

vivarium_gates_nutrition_optimization_child