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genome-scripts
Genome Scripts used in fungal comparative genomicsmTEA
Mosquito TE Annotationhtbda_perl_class
High Throughput Biological Data Analysis using Perlsubopt-kaks
Suboptimal alignments and Ka, Ks calculationsfungi-gene-prediction-params
Provide trained gene prediction parameters for Fungal genome annotationTutorial_GenomeEvolution
Genome Evolution Lecture for Phylogenomics Workshopfungaltools
Misc scripts for fungal tools, mostly for use in papersshort-read-db
Database for shortreads and comparing overlap with genomic featurescndtools
fork of cndtoolspubmed_to_COA
Write a Collaborating Authors table suitable for USDA/NSF COA/COI filesotu_cluster
Cluster OTUs based on % similarity, mostly scripts to pipeline into other toolsgbrowse_conf_fungalgenomes
Supporting fungalgenomes.org websitemobedac-fungi
MOBeDAC Fungi Databasepan-fungal-project
A Pan-Fungal Genomes Databasethesis
Perl Code from my Thesis (2006)CSHL_NGS
NGS DNA analysis for the CSHL 2012 Programming for Biology courseucr-biocluster-scripts
UCR Biocluster job scriptsmacports
My local macports fileshyphaltip.github.io
GitHub home for hyphaltipGEN220_2015
GEN220 course, Fall 2015 editionH3K27
H3K27 neurospora projectTEamRice
Rice TE projectuniprot_tools
Some tools manipulating uniprot/sprot related datarhizobia-genomics
Scripts to support bacterial genomics projectneolecta
neolecta annotation and analysisLove Open Source and this site? Check out how you can help us