• Stars
    star
    14
  • Rank 1,399,116 (Top 29 %)
  • Language
    Smalltalk
  • License
    MIT License
  • Created about 9 years ago
  • Updated 9 months ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Bioinformatics Library for Pharo

More Repositories

1

COVID-19-train-audio

COVID-19 Coughs files for training AI models
Python
42
star
2

pi

Pharo Install - A CLI tool for installing Pharo Smalltalk packages
Shell
37
star
3

Territorial

Pharo Smalltalk package for Geographic Information Retrieval
Smalltalk
17
star
4

badges

A tool to build your git repository badges in Pharo
Smalltalk
9
star
5

package-formulas

Pharo Package Manager UI
Smalltalk
9
star
6

COVID-2019

Analysis of Coronavirus outbreak data with Pharo
Smalltalk
7
star
7

merlin

Wizard builder for Pharo
Smalltalk
6
star
8

GraphViz

Pharo Smalltalk GraphViz binding
Smalltalk
6
star
9

CommonUtils

Common method utilities for Pharo Smalltalk
Smalltalk
5
star
10

falsehoods_smalltalk

Falsehoods Programmers Believe About Smalltalk
5
star
11

STRUCTUREPipelines

Pipelines to run STRUCTURE using multiple front-ends (CLUMPAK+StrAuto, Structure_threader)
Shell
5
star
12

ISO3166

ISO 3166-1 implementation for Pharo Smalltalk
Smalltalk
4
star
13

ethnologue

An object model to the Ethnologue project for Pharo
Smalltalk
4
star
14

DesignInfo

Collects package metrics (SLOC)
Smalltalk
4
star
15

ccbc

Code Critics Bar Chart for Pharo Smalltalk
Smalltalk
4
star
16

PennCNV.Illumina

Workflow for running PennCNV with Illumina platform final report
Shell
3
star
17

MetacelloFileDownload

Helpers to download resources in Baseline or Metacello Configurations (Pharo Smalltalk)
Smalltalk
3
star
18

ApplicationSecurity

A Smalltalk domain-independent security model which you can easily instantiate in your applications
Smalltalk
3
star
19

OpenCOVID19-AIDetectApp

Development of AI audio app to compare cough of Coronavirus infected versus Normal cough
TypeScript
3
star
20

reprex-it

Evaluate, format and share Pharo scripts and expressions on Github or Discord.
Smalltalk
3
star
21

SpecUIAddOns

Add-ons for Spec (Smalltalk UI description framework)
Smalltalk
3
star
22

pharo-vm-builder

Scripts to ease Pharo VM building
Shell
3
star
23

libshoco

Pharo wrapper for Shoco string compression C library
Smalltalk
3
star
24

license-selector

Pharo app to browse updated available licenses from SPDX License List
Smalltalk
3
star
25

FuzzySearcher

Simplified Smalltalk implementation of ambiguous matching algorithm based on Baeta-Yates, R.A., Gonnet, G.H., Wu, S. and Manber, U
Smalltalk
2
star
26

PennCNV.Affy

Workflow for running PennCNV with Affymetrix platform files
Shell
2
star
27

AnimalGeo

World animal species synonyms and geolocations dictionary
Smalltalk
2
star
28

REHH2-docker

Dockerfile for REHH version 2.0.4
R
2
star
29

BioScripts

A collection of miscellaneous bioinformatics scripts
Smalltalk
2
star
30

Z3950

ZOOM FFI Client for Z39.50 Protocol. A binding of the ZOOM Yaz client for Squeak and Pharo
Smalltalk
1
star
31

SPARQL

Generic SPARQL client API for Smalltalk
Smalltalk
1
star
32

mydot

My dotted files for bash
Shell
1
star
33

PSotD

Pharo Script of the Day Repository
Smalltalk
1
star
34

qlustar_scripts

Qlustar utility scripts
Shell
1
star
35

FixedDecimal

Representation of precise decimals in Pharo Smalltalk
Smalltalk
1
star
36

GADM

A browseable GADM world tree for Pharo Smalltalk
Smalltalk
1
star
37

libstemmer

Pharo uFFI wrapper for the Porter Stemmer algorithm
Smalltalk
1
star
38

StringExtensions

Add useful String extension method to Pharo String class
Smalltalk
1
star
39

hisat2_bovine

Scripts to index and align Bovine genome with HISAT2
Shell
1
star
40

edgeR.EnhancedVolcanoPlot

Enhanced volcano plot using edgeR data
R
1
star
41

minimal-pharo-docker

Shell
1
star
42

QuantiSNP2

1
star
43

CodeGenerator

Collection of Pharo Smalltalk utilities related with code generation
Smalltalk
1
star
44

db-benchmarks

Smalltalk
1
star
45

cflow-ui

Friendly UI Front-End to cflow in Pharo
Smalltalk
1
star