grunwaldlab/quiltr grunwaldlab/quiltr

  • Stars
    star
    5
  • Rank 2,861,937 (Top 57 %)
  • Language
    R
  • Created over 10 years ago
  • Updated over 8 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
grunwaldlab/quiltr
github

grunwaldlab

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

R package for making website representations of directories

More Repositories

1

metacoder

Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data
R
135
star
2

Population_Genetics_in_R

A primer for computational tools to analyze genetics of populations in R
HTML
84
star
3

poppr

🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
R
68
star
4

analysis_of_microbiome_community_data_in_r

This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://grunwaldlab.github.io/analysis_of_microbiome_community_data_in_r/
HTML
17
star
5

Reproducible-science-in-R

This site provides information on conducting reproducible science using the R language.
HTML
14
star
6

krisp

A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using genome data.
Python
10
star
7

effectR

An R package to call oomycete effectors
R
10
star
8

Microbe-ID

Microbe-ID
JavaScript
4
star
9

aps_workshop

2
star
10

audpc_example

An example analysis for calculating AUDPC using RMarkdown
HTML
2
star
11

psminer

Work in progress. Backend for pathogensurveillance
R
2
star
12

supplementary-poppr-2.0

Supplementary materials for Frontiers paper on novel R tools for population genomics
HTML
2
star
13

metacoder_documentation

Documentation for the metacoder R package
HTML
2
star
14

popgen_review_examples

Examples for population genetics review manuscript
HTML
1
star
15

phytophthora_id

Webpage of Phytophthora ID of the Grunwald lab.
JavaScript
1
star
16

ezec

Easy Interface to Effective Concentration Calculations
R
1
star
17

labtools

An R package for lab notebook upkeep
R
1
star
18

Supplements_Knaus_Pinfestans_CNV

Supplements for Knaus et al. manuscript on changes variation in genic copy number in Phytophthora infestans and relatives.
1
star
19

OomyceteDB

A new barcode for characterizing oomycete communities.
HTML
1
star
20

poppr-poster-aps-2016

source data for the APS 2016 poster on Tools for analysis of clonal population genetic data in R
HTML
1
star
21

bioinformatics_practice

Record of exercises done to learn bioinformatics
R
1
star