gkaguirrelab/flywheelMRSupport

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Created about 7 years ago
Updated 10 months ago

gkaguirrelab/flywheelMRSupport

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Routines to support the analysis of structural and functional MRI data in the Flywheel environment

gkaModelEye

An anatomically accurate, ray-traced model eye in MATLAB.

transparentTrack

Determine pupil size and gaze location in IR video of the eye

MRklar

Toolbox for preprocessing magnetic resonance (MR) imaging data in Matlab

TemplateRetinotopy

Project repository for the automatic identification of cortical retinotopic organization using functional correlations

retinaTOMEAnalysis

Routines to extract retinal layer thickness values from Heidelberg OCT studies and to relate these measures to MRI/fMRI studies.

preregistrations

Preregistration documents for the GKAguirre Lab

fixelTOMEAnalysis

Analysis code and Flywheel gear files for TOME fixel-based diffusion analysis

DeBruijn

Software for the generation de Bruijn sequences for neuroscience experiments

forwardModel

LiveTrackfMRIToolbox

Toolbox to operate the LiveTrackAV eyetracking camera under protocols developed by GKAguirre Lab at the University of Pennsylvania.

eyeTrackTOMEAnalysis

analysis code for processed eye and pupil tracking data from the University of Pennsylvania HCLV Connectome project

poemAnalysis

Analysis code for the Penn Online Evaluation of Migraine (POEM)

rgcDisplacementMap

tools to model retinal ganglion cell displacement from receptive field locations in the human retina

iAdapt

Python code for an on-line test of precision and perceptual adaptation

LFContrastAnalysis

Analysis code for the LFContrast project.

OLApproach_Squint

Code to support collection of EMG and perception data under an OLApproach.

LiveTrackVideoRecorder

Python code that operates under Windows to record video input via ffmpeg commands

vepMELAanalysis

analysis of VEP data

mriTOMEAnalysis

Analysis of structural and functional MRI data from the Cones-to-Cortex, Penn normal vision HCP project

WheresWaldo_EyeTracking

Code for eye tracking experiments and analysis associated with Epstein's lab Where's Waldo project.

pupilPIPRAnalysis

For analysis of PIPRMaxPulse data

cgrpAnalysis

Analysis of Kaiser light sensitivity data

PupilAnalysisToolbox

Analysis of pupillometric data

fmriMelanopsinMRIAnalysis

Project repository for the analysis of melanopsin MRI measurements in the Aguirre/Brainard Labs at the University of Pennsylvania

Datta_2012_PLosOne

A digital atlas of the canine brain